Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00472 and BSU02660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:36
# Commandline: needle
# -asequence dna-align/BSNT_00472___ycbU.1.22522.seq
# -bsequence dna-align/BSU02660___ycbU.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00472___ycbU-BSU02660___ycbU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00472___ycbU-BSU02660___ycbU.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00472___ycbU
# 2: BSU02660___ycbU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1114
# Identity: 1090/1114 (97.8%)
# Similarity: 1090/1114 (97.8%)
# Gaps: 2/1114 ( 0.2%)
# Score: 5342.0
#
#
#=======================================
BSNT_00472___ 1 ATGGAGCATTTGCCGCAGCAGTATCGTCATTTATTCCCAACCTTGCAGAC 50
|||||||||||||||.||||||||||.||.||||||||||||||||||||
BSU02660___yc 1 ATGGAGCATTTGCCGGAGCAGTATCGCCAGTTATTCCCAACCTTGCAGAC 50
BSNT_00472___ 51 GCATACGATGCTTGCCAGCTGTTCTCAGAGCGCATTGGCAGAGCCTGTAT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc 51 GCATACGATGCTTGCCAGCTGTTCTCAGAGCGCATTGGCAGAGCCTGTAT 100
BSNT_00472___ 101 CAAGGGCGATCCAGGATTATCATGATAGCCTGCTGTATAAAGGGACGAAC 150
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU02660___yc 101 CAAGGGCGATCCAGGATTATTATGATAGCCTGCTGTATAAAGGGACGAAC 150
BSNT_00472___ 151 TGGAAAGAAGCGATTGAAAAAACAGAGTTTGCGAGAAACGAGTTTGCAAA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc 151 TGGAAAGAAGCGATTGAAAAAACAGAGTTTGCGAGAAACGAGTTTGCAAA 200
BSNT_00472___ 201 GCTGATCGGGGCTGAACCGGATGAAGTGGCGATTGTGCCGTCAGTTTCTG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc 201 GCTGATCGGGGCTGAACCGGATGAAGTGGCGATTGTGCCGTCAGTTTCTG 250
BSNT_00472___ 251 ATGCACTGGTTTCTGTAGCATCGTCCTTAACTGCATTTGGAAAGAAGCAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc 251 ATGCACTGGTTTCTGTAGCATCGTCCTTAACTGCATTTGGAAAGAAGCAC 300
BSNT_00472___ 301 GTTGTATATACAGATATGGATTTTCCGGCGGTGCCTCATGTTTGGCAGGC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc 301 GTTGTATATACAGATATGGATTTTCCGGCGGTGCCTCATGTTTGGCAGGC 350
BSNT_00472___ 351 ACACTCCGATTATACCGTATCCGTCATTCCATCAATAGACGGCGTGCTGC 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc 351 ACACTCCGATTATACCGTATCCGTCATTCCATCAATAGACGGCGTGCTGC 400
BSNT_00472___ 401 CGCTTGAACAATATGAAACGCATATTTCGGATGAAACAGTACTGACGTGT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc 401 CGCTTGAACAATATGAAACGCATATTTCGGATGAAACAGTACTGACGTGT 450
BSNT_00472___ 451 GTTCCTCACGTTCATTATCGTGACGGCTATGTTCAGGATATAAAAGCGAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc 451 GTTCCTCACGTTCATTATCGTGACGGCTATGTTCAGGATATAAAAGCGAT 500
BSNT_00472___ 501 TGCCGAGATTTCTCAGAGAAAGGGCTCTTTATTGTTTGTAGATGCTTATC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc 501 TGCCGAGATTTCTCAGAGAAAGGGCTCTTTATTGTTTGTAGATGCTTATC 550
BSNT_00472___ 551 AATCAGCCGGGCATATTCCCATTGATGTGAAGGAATGGGGCGAAGAAATG 600
||||||||||||||||||||||||||||||||||||||||||.|||.|||
BSU02660___yc 551 AATCAGCCGGGCATATTCCCATTGATGTGAAGGAATGGGGCGTAGATATG 600
BSNT_00472___ 601 CTGGCAGCAGGCACCCGGAAGTATTTGCTCGGCATACCGGGTGTGGCGTT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc 601 CTGGCAGCAGGCACCCGGAAGTATTTGCTCGGCATACCGGGTGTGGCGTT 650
BSNT_00472___ 651 TCTTTATGTGAGAAAGGAGCTGGCTGACGCACTGAAGCCGAAAGCATCAG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc 651 TCTTTATGTGAGAAAGGAGCTGGCTGACGCACTGAAGCCGAAAGCATCAG 700
BSNT_00472___ 701 CTTGGTTCGGCAGAGAGAACGGATTTGAGGGGGCTTATGCGAAAGACGCG 750
||||||||||.|||||||.|||||||||.|||||||||||.||||.||||
BSU02660___yc 701 CTTGGTTCGGAAGAGAGAGCGGATTTGATGGGGCTTATGCAAAAGTCGCG 750
BSNT_00472___ 751 CGCCGTTTTCAAACGGGCACCCCAGCTTTTATCAGCGTATACGCAGCTGC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc 751 CGCCGTTTTCAAACGGGCACCCCAGCTTTTATCAGCGTATACGCAGCTGC 800
BSNT_00472___ 801 AGCGGCTTTATCGCTGCTGAATCATATTGGAGTTTCTCATACTC-GGGAT 849
||||||||||||||||||||||||||||||.|||||||||| || |||||
BSU02660___yc 801 AGCGGCTTTATCGCTGCTGAATCATATTGGGGTTTCTCATA-TCAGGGAT 849
BSNT_00472___ 850 CATGTGAAAACGATCTGTGCCGATGCAGTTCAATATGCCGCTGAAAAAGG 899
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc 850 CATGTGAAAACGATCTGTGCCGATGCAGTTCAATATGCCGCTGAAAAAGG 899
BSNT_00472___ 900 CCTGCAGCTGGCGGCGGCACAAGGTGGGGGTCAGCCAGGTATGGTTGCGA 949
||||||||||||||||||||||||||||..||||||.||.||||||||||
BSU02660___yc 900 CCTGCAGCTGGCGGCGGCACAAGGTGGGATTCAGCCGGGCATGGTTGCGA 949
BSNT_00472___ 950 TCCGGGATGAGCGGGCATCGGAAACGGCGGCGTTGCTGAAGAAGAAAAAA 999
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU02660___yc 950 TCCGGGATGAGCGGGCATCGGAAACGGCGGGGTTGCTGAAGAAGAAAAAA 999
BSNT_00472___ 1000 GTGATTTGCGCGCCGCGGGACAATGTGATCCGTCTCGCTCCCCATTTTTA 1049
||||||||||||||||||||.|||||.|||||||||||||||||||||||
BSU02660___yc 1000 GTGATTTGCGCGCCGCGGGAAAATGTTATCCGTCTCGCTCCCCATTTTTA 1049
BSNT_00472___ 1050 TAATACGAAGGAGGACATGCGGCGCGCGATTGATGAGATCGCGGCGAAAA 1099
|||||||||||||||.|||||||.||||||||||||.|||||||||||||
BSU02660___yc 1050 TAATACGAAGGAGGAAATGCGGCACGCGATTGATGAAATCGCGGCGAAAA 1099
BSNT_00472___ 1100 CGATCCACAAGTAA 1113
||||||||||||||
BSU02660___yc 1100 CGATCCACAAGTAA 1113
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