Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00472 and BSU02660

See Amino acid alignment / Visit BSNT_00472 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:36
# Commandline: needle
#    -asequence dna-align/BSNT_00472___ycbU.1.22522.seq
#    -bsequence dna-align/BSU02660___ycbU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00472___ycbU-BSU02660___ycbU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00472___ycbU-BSU02660___ycbU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00472___ycbU
# 2: BSU02660___ycbU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1114
# Identity:    1090/1114 (97.8%)
# Similarity:  1090/1114 (97.8%)
# Gaps:           2/1114 ( 0.2%)
# Score: 5342.0
# 
#
#=======================================

BSNT_00472___      1 ATGGAGCATTTGCCGCAGCAGTATCGTCATTTATTCCCAACCTTGCAGAC     50
                     |||||||||||||||.||||||||||.||.||||||||||||||||||||
BSU02660___yc      1 ATGGAGCATTTGCCGGAGCAGTATCGCCAGTTATTCCCAACCTTGCAGAC     50

BSNT_00472___     51 GCATACGATGCTTGCCAGCTGTTCTCAGAGCGCATTGGCAGAGCCTGTAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc     51 GCATACGATGCTTGCCAGCTGTTCTCAGAGCGCATTGGCAGAGCCTGTAT    100

BSNT_00472___    101 CAAGGGCGATCCAGGATTATCATGATAGCCTGCTGTATAAAGGGACGAAC    150
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU02660___yc    101 CAAGGGCGATCCAGGATTATTATGATAGCCTGCTGTATAAAGGGACGAAC    150

BSNT_00472___    151 TGGAAAGAAGCGATTGAAAAAACAGAGTTTGCGAGAAACGAGTTTGCAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc    151 TGGAAAGAAGCGATTGAAAAAACAGAGTTTGCGAGAAACGAGTTTGCAAA    200

BSNT_00472___    201 GCTGATCGGGGCTGAACCGGATGAAGTGGCGATTGTGCCGTCAGTTTCTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc    201 GCTGATCGGGGCTGAACCGGATGAAGTGGCGATTGTGCCGTCAGTTTCTG    250

BSNT_00472___    251 ATGCACTGGTTTCTGTAGCATCGTCCTTAACTGCATTTGGAAAGAAGCAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc    251 ATGCACTGGTTTCTGTAGCATCGTCCTTAACTGCATTTGGAAAGAAGCAC    300

BSNT_00472___    301 GTTGTATATACAGATATGGATTTTCCGGCGGTGCCTCATGTTTGGCAGGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc    301 GTTGTATATACAGATATGGATTTTCCGGCGGTGCCTCATGTTTGGCAGGC    350

BSNT_00472___    351 ACACTCCGATTATACCGTATCCGTCATTCCATCAATAGACGGCGTGCTGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc    351 ACACTCCGATTATACCGTATCCGTCATTCCATCAATAGACGGCGTGCTGC    400

BSNT_00472___    401 CGCTTGAACAATATGAAACGCATATTTCGGATGAAACAGTACTGACGTGT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc    401 CGCTTGAACAATATGAAACGCATATTTCGGATGAAACAGTACTGACGTGT    450

BSNT_00472___    451 GTTCCTCACGTTCATTATCGTGACGGCTATGTTCAGGATATAAAAGCGAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc    451 GTTCCTCACGTTCATTATCGTGACGGCTATGTTCAGGATATAAAAGCGAT    500

BSNT_00472___    501 TGCCGAGATTTCTCAGAGAAAGGGCTCTTTATTGTTTGTAGATGCTTATC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc    501 TGCCGAGATTTCTCAGAGAAAGGGCTCTTTATTGTTTGTAGATGCTTATC    550

BSNT_00472___    551 AATCAGCCGGGCATATTCCCATTGATGTGAAGGAATGGGGCGAAGAAATG    600
                     ||||||||||||||||||||||||||||||||||||||||||.|||.|||
BSU02660___yc    551 AATCAGCCGGGCATATTCCCATTGATGTGAAGGAATGGGGCGTAGATATG    600

BSNT_00472___    601 CTGGCAGCAGGCACCCGGAAGTATTTGCTCGGCATACCGGGTGTGGCGTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc    601 CTGGCAGCAGGCACCCGGAAGTATTTGCTCGGCATACCGGGTGTGGCGTT    650

BSNT_00472___    651 TCTTTATGTGAGAAAGGAGCTGGCTGACGCACTGAAGCCGAAAGCATCAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc    651 TCTTTATGTGAGAAAGGAGCTGGCTGACGCACTGAAGCCGAAAGCATCAG    700

BSNT_00472___    701 CTTGGTTCGGCAGAGAGAACGGATTTGAGGGGGCTTATGCGAAAGACGCG    750
                     ||||||||||.|||||||.|||||||||.|||||||||||.||||.||||
BSU02660___yc    701 CTTGGTTCGGAAGAGAGAGCGGATTTGATGGGGCTTATGCAAAAGTCGCG    750

BSNT_00472___    751 CGCCGTTTTCAAACGGGCACCCCAGCTTTTATCAGCGTATACGCAGCTGC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc    751 CGCCGTTTTCAAACGGGCACCCCAGCTTTTATCAGCGTATACGCAGCTGC    800

BSNT_00472___    801 AGCGGCTTTATCGCTGCTGAATCATATTGGAGTTTCTCATACTC-GGGAT    849
                     ||||||||||||||||||||||||||||||.|||||||||| || |||||
BSU02660___yc    801 AGCGGCTTTATCGCTGCTGAATCATATTGGGGTTTCTCATA-TCAGGGAT    849

BSNT_00472___    850 CATGTGAAAACGATCTGTGCCGATGCAGTTCAATATGCCGCTGAAAAAGG    899
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02660___yc    850 CATGTGAAAACGATCTGTGCCGATGCAGTTCAATATGCCGCTGAAAAAGG    899

BSNT_00472___    900 CCTGCAGCTGGCGGCGGCACAAGGTGGGGGTCAGCCAGGTATGGTTGCGA    949
                     ||||||||||||||||||||||||||||..||||||.||.||||||||||
BSU02660___yc    900 CCTGCAGCTGGCGGCGGCACAAGGTGGGATTCAGCCGGGCATGGTTGCGA    949

BSNT_00472___    950 TCCGGGATGAGCGGGCATCGGAAACGGCGGCGTTGCTGAAGAAGAAAAAA    999
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU02660___yc    950 TCCGGGATGAGCGGGCATCGGAAACGGCGGGGTTGCTGAAGAAGAAAAAA    999

BSNT_00472___   1000 GTGATTTGCGCGCCGCGGGACAATGTGATCCGTCTCGCTCCCCATTTTTA   1049
                     ||||||||||||||||||||.|||||.|||||||||||||||||||||||
BSU02660___yc   1000 GTGATTTGCGCGCCGCGGGAAAATGTTATCCGTCTCGCTCCCCATTTTTA   1049

BSNT_00472___   1050 TAATACGAAGGAGGACATGCGGCGCGCGATTGATGAGATCGCGGCGAAAA   1099
                     |||||||||||||||.|||||||.||||||||||||.|||||||||||||
BSU02660___yc   1050 TAATACGAAGGAGGAAATGCGGCACGCGATTGATGAAATCGCGGCGAAAA   1099

BSNT_00472___   1100 CGATCCACAAGTAA   1113
                     ||||||||||||||
BSU02660___yc   1100 CGATCCACAAGTAA   1113


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