Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00408 and BSU02280

See Amino acid alignment / Visit BSNT_00408 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:29
# Commandline: needle
#    -asequence dna-align/BSNT_00408___ybfM.1.22522.seq
#    -bsequence dna-align/BSU02280___ybfM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00408___ybfM-BSU02280___ybfM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00408___ybfM-BSU02280___ybfM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00408___ybfM
# 2: BSU02280___ybfM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 489
# Identity:     484/489 (99.0%)
# Similarity:   484/489 (99.0%)
# Gaps:           0/489 ( 0.0%)
# Score: 2400.0
# 
#
#=======================================

BSNT_00408___      1 ATGGAATTAGTTCAGCAGCTCATAGCGGATTACGGTTATCTCGCTATTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02280___yb      1 ATGGAATTAGTTCAGCAGCTCATAGCGGATTACGGTTATCTCGCTATTTT     50

BSNT_00408___     51 TTTGATGTTGGTATTAGGGATTGTAGGATTGCCGATTCCAGATGAAGTAA    100
                     |||||||.||||||||||.|||||||||||||||||||||||||||||.|
BSU02280___yb     51 TTTGATGCTGGTATTAGGAATTGTAGGATTGCCGATTCCAGATGAAGTGA    100

BSNT_00408___    101 TGATGACCGTTGTTGGCTATTTCACGCATACCGATGTGTTGAATTATGAG    150
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU02280___yb    101 TGATGACCGTTGTTGGCTATTTCACGCATACCGATGTATTGAATTATGAG    150

BSNT_00408___    151 CTTTCGATATTGATTAGTTTTGTCGGGGCTTTGTTAGGTATGCTGATCAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02280___yb    151 CTTTCGATATTGATTAGTTTTGTCGGGGCTTTGTTAGGTATGCTGATCAG    200

BSNT_00408___    201 CTACATGATTGGCAGAAAAGCCGGACGCCCGTTTATCGACAAGTACGGCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02280___yb    201 CTACATGATTGGCAGAAAAGCCGGACGCCCGTTTATCGACAAGTACGGCA    250

BSNT_00408___    251 AGTGGGTCGGCTTAAAAGAAAAAAGAATGATGAAAGTGGAAAAATGGATG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02280___yb    251 AGTGGGTCGGCTTAAAAGAAAAAAGAATGATGAAAGTGGAAAAATGGATG    300

BSNT_00408___    301 AAGAAATACGGTCCATATTCTCTTATTTTAGGTTATTTTATTCCCGGCGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02280___yb    301 AAGAAATACGGTCCATATTCTCTTATTTTAGGTTATTTTATTCCCGGCGT    350

BSNT_00408___    351 CAGACATGTGACGTGCTACTTTTCGGGGATCGGCAAAATGGATCTGAAAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02280___yb    351 CAGACATGTGACGTGCTACTTTTCGGGGATCGGCAAAATGGATCTGAAAA    400

BSNT_00408___    401 CGTATGTTGCGTTTGCGGCAATCGGCGCCTTTTTATGGTGCTTTGTTTTT    450
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU02280___yb    401 CGTATGTTGCGTTTGCTGCAATCGGCGCCTTTTTATGGTGCTTTGTTTTT    450

BSNT_00408___    451 ATTACAATCGGAAGGGTTATAGGGATTATTCATGTTTAA    489
                     |||||||||||||||||||||||||||||||||||||||
BSU02280___yb    451 ATTACAATCGGAAGGGTTATAGGGATTATTCATGTTTAA    489


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