Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00405 and BSU02250
See
Amino acid alignment /
Visit
BSNT_00405 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:28
# Commandline: needle
# -asequence dna-align/BSNT_00405___ybfJ.1.22522.seq
# -bsequence dna-align/BSU02250___ybfJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00405___ybfJ-BSU02250___ybfJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00405___ybfJ-BSU02250___ybfJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00405___ybfJ
# 2: BSU02250___ybfJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 393/399 (98.5%)
# Similarity: 393/399 (98.5%)
# Gaps: 0/399 ( 0.0%)
# Score: 1941.0
#
#
#=======================================
BSNT_00405___ 1 ATGTATTCAACAATATTCAATATTGGGCAAATCAATAAATACAGCAAACT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02250___yb 1 ATGTATTCAACAATATTCAATATTGGGCAAATCAATAAATACAGCAAACT 50
BSNT_00405___ 51 AGCCATATTCATGTCTATTTTGTTTTTATGCGGGTGCAGTTCGCAGACGC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02250___yb 51 AGCCATATTCATGTCTATTTTGTTTTTATGCGGGTGCAGTTCGCAGACGC 100
BSNT_00405___ 101 ATTCTTCTCAAAAAGAAACGACTATTCCTGTCACTCTTCATGTGGAGGAT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02250___yb 101 ATTCTTCTCAAAAAGAAACGACTATTCCTGTCACTCTTCATGTGGAGGAT 150
BSNT_00405___ 151 GCTAAGGGGCTGCCGGTCGAAGGGGTTCAAGTGACGATTGTCAAAGCGCC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02250___yb 151 GCTAAGGGGCTGCCGGTCGAAGGGGTTCAAGTGACGATTGTCAAAGCGCC 200
BSNT_00405___ 201 CTCTTCAGATGAGGAGCCGAGTACAGAGATTGGTGAGATACTCGGTAAAA 250
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU02250___yb 201 CTCTTCAGATGAGGAGCCGAGTACAGAGATTGGCGAGATACTCGGTAAAA 250
BSNT_00405___ 251 CAGACAAAAACGGAGATATCAAATGGGATACTGGCAGAAAAGGCGATTAC 300
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU02250___yb 251 CAGACAAAAACGGAGATATCAAATGGGATACCGGCAGAAAAGGCGATTAC 300
BSNT_00405___ 301 TCAGTCGCATTGACGAAGGGTGAAACATCAGTAACCCATCAGATCTCGTT 350
||||||||.||||||||||||||||||||||||||||||||.||||||||
BSU02250___yb 301 TCAGTCGCGTTGACGAAGGGTGAAACATCAGTAACCCATCACATCTCGTT 350
BSNT_00405___ 351 AACAGAGGATATGAAAGATCATGCCATTCCATTAGTCTTCAAAGAATAG 399
|||||||||||..||||||||||||||||||||||||||||||||||||
BSU02250___yb 351 AACAGAGGATAAAAAAGATCATGCCATTCCATTAGTCTTCAAAGAATAG 399
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.