Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00404 and BSU02240

See Amino acid alignment / Visit BSNT_00404 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:28
# Commandline: needle
#    -asequence dna-align/BSNT_00404___mpr.1.22522.seq
#    -bsequence dna-align/BSU02240___mpr.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00404___mpr-BSU02240___mpr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00404___mpr-BSU02240___mpr.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00404___mpr
# 2: BSU02240___mpr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 942
# Identity:     932/942 (98.9%)
# Similarity:   932/942 (98.9%)
# Gaps:           0/942 ( 0.0%)
# Score: 4620.0
# 
#
#=======================================

BSNT_00404___      1 ATGAAATTAGTTCCAAGATTCAGAAAACAATGGTTCGCTTACTTAACGGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02240___mp      1 ATGAAATTAGTTCCAAGATTCAGAAAACAATGGTTCGCTTACTTAACGGT     50

BSNT_00404___     51 TTTGTGTTTGGCTTTGGCAGCAGCGGTTTCTTTTGGCGTACCGGCAAAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02240___mp     51 TTTGTGTTTGGCTTTGGCAGCAGCGGTTTCTTTTGGCGTACCGGCAAAAG    100

BSNT_00404___    101 CGGCAGAGAACCCGCAAACTTCTGTATCGAATACCGGTAAAGAAGGTGAT    150
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU02240___mp    101 CGGCAGAGAACCCGCAAACTTCTGTATCGAATACCGGTAAAGAAGCTGAT    150

BSNT_00404___    151 GCTACGAAAAACCAAACGTCAAAAGCAGAACAGGTTTCTGCCCCTTATGA    200
                     |||||||||||||||||||||||||||||.||||||||.|||||||||||
BSU02240___mp    151 GCTACGAAAAACCAAACGTCAAAAGCAGATCAGGTTTCCGCCCCTTATGA    200

BSNT_00404___    201 GGGAATCGGAAAAACAAGTAAATCGTTATACGGCGGCCAAACGGAACTGG    250
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU02240___mp    201 GGGAACCGGAAAAACAAGTAAATCGTTATACGGCGGCCAAACGGAACTGG    250

BSNT_00404___    251 AGAAAAACATTCAAACTTTACAGCCTTCGAGCATTATCGGAACTGATGAA    300
                     |.||||||||||||||.|||||||||||||||||||||||||||||||||
BSU02240___mp    251 AAAAAAACATTCAAACCTTACAGCCTTCGAGCATTATCGGAACTGATGAA    300

BSNT_00404___    301 CGCACCAGAATCTCCAGCACGACATCTTTTCCATATAGAGCAACCGTTCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02240___mp    301 CGCACCAGAATCTCCAGCACGACATCTTTTCCATATAGAGCAACCGTTCA    350

BSNT_00404___    351 ACTGTCAATCAAGTATCCCAACACTTCAAGCACTTATGGATGTACCGGAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02240___mp    351 ACTGTCAATCAAGTATCCCAACACTTCAAGCACTTATGGATGTACCGGAT    400

BSNT_00404___    401 TTTTAATCAATCCAAATACAGTCGTCACGGCTGGACATTGTGTGTACAGC    450
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU02240___mp    401 TTTTAGTCAATCCAAATACAGTCGTCACGGCTGGACATTGTGTGTACAGC    450

BSNT_00404___    451 CAGGATCATGGATGGGCTTCGACGATAACCGCCGCGCCGGGCCGCAATGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02240___mp    451 CAGGATCATGGATGGGCTTCGACGATAACCGCCGCGCCGGGCCGCAATGG    500

BSNT_00404___    501 CTCGTCATATCCGTACGGTACTTATTCAGGCACGATGTTTTACTCCGTCA    550
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU02240___mp    501 TTCGTCATATCCGTACGGTACTTATTCAGGCACGATGTTTTACTCCGTCA    550

BSNT_00404___    551 AAGGATGGACGGAAAGCAAAGACACCAATTATGATTACGGAGCTATTAAA    600
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU02240___mp    551 AAGGATGGACGGAAAGCAAAGACACCAACTATGATTACGGAGCTATTAAA    600

BSNT_00404___    601 TTAAACGGTTCTCCTGGAAACACGGTTGGCTGGTACGGCTACCGGACTAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02240___mp    601 TTAAACGGTTCTCCTGGAAACACGGTTGGCTGGTACGGCTACCGGACTAC    650

BSNT_00404___    651 AAACAGCAGCAGTCCCGTGGGCCTTTCCTCGTCAGTGACAGGATTCCCGT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU02240___mp    651 AAACAGCAGCAGTCCCGTGGGCCTTTCCTCGTCAGTGACAGGATTCCCAT    700

BSNT_00404___    701 GTGACAAAACCTTTGGCACGATGTGGTCTGATACAAAGCCGATTCGCTCC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02240___mp    701 GTGACAAAACCTTTGGCACGATGTGGTCTGATACAAAGCCGATTCGCTCC    750

BSNT_00404___    751 GCTGAAACGTATAAGCTGACCTATACAACCGATACGTACGGCTGCCAAAG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02240___mp    751 GCTGAAACGTATAAGCTGACCTATACAACCGATACGTACGGCTGCCAAAG    800

BSNT_00404___    801 CGGCTCGCCTGTTTATCGAAACTACAGTGATACAGGGCAGACAGCTATTG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02240___mp    801 CGGCTCGCCTGTTTATCGAAACTACAGTGATACAGGGCAGACAGCTATTG    850

BSNT_00404___    851 CCATTCACACGAACGGAGGATCGTCATATAACTTGGGAACAAGGGTGACG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02240___mp    851 CCATTCACACGAACGGAGGATCGTCATATAACTTGGGAACAAGGGTGACG    900

BSNT_00404___    901 AACGATGTATTCAACAATATTCAATATTGGGCAAATCAATAA    942
                     ||||||||||||||||||||||||||||||||||||||||||
BSU02240___mp    901 AACGATGTATTCAACAATATTCAATATTGGGCAAATCAATAA    942


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