Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00385 and BSU02180

See Amino acid alignment / Visit BSNT_00385 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:27
# Commandline: needle
#    -asequence dna-align/BSNT_00385.1.22522.seq
#    -bsequence dna-align/BSU02180___ybfE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00385-BSU02180___ybfE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00385-BSU02180___ybfE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00385
# 2: BSU02180___ybfE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     161/286 (56.3%)
# Similarity:   161/286 (56.3%)
# Gaps:         122/286 (42.7%)
# Score: 773.0
# 
#
#=======================================

BSNT_00385         0 --------------------------------------------------      0
                                                                       
BSU02180___yb      1 GTGAACCATTGCTTACATTCAAACACACTTGCCAAAATCGTATGTACTGT     50

BSNT_00385         0 --------------------------------------------------      0
                                                                       
BSU02180___yb     51 GACATTAATAACGTTATACTTCTATTTTTTCAGCACTCGTTTTAATGAAT    100

BSNT_00385         1 --------------------ATGTTTTTTGCCTTGATCGGCCTTTTTTTG     30
                                         |||||||||||||||||||||| |||||||
BSU02180___yb    101 TAATAGAATTAGCTGTACAAATGTTTTTTGCCTTGATCGGCC-TTTTTTG    149

BSNT_00385        31 GGTTTTTATCGTTTCCCCATTTTCAAG-AAATTTCAAATTTCTGAACGCT     79
                     |||||||||.||||||||||||||||| |||.||||||||||||||||||
BSU02180___yb    150 GGTTTTTATTGTTTCCCCATTTTCAAGAAAAGTTCAAATTTCTGAACGCT    199

BSNT_00385        80 TCAAACAAAAATCCGAAAACGCCCGCATAGTCGGTATGATCAACTTCGTA    129
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU02180___yb    200 TCAAACAAAAATCCGAAAACGCCCGCATAGTCGGTATGATCGACTTCGTA    249

BSNT_00385       130 TTAGAACAAAAATACAAAAAAAGCATCTCTGAATAA    165
                     ||||||||||||||||||||||||||||||||||||
BSU02180___yb    250 TTAGAACAAAAATACAAAAAAAGCATCTCTGAATAA    285


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