Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00372 and BSU02110

See Amino acid alignment / Visit BSNT_00372 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:26
# Commandline: needle
#    -asequence dna-align/BSNT_00372.1.22522.seq
#    -bsequence dna-align/BSU02110___ybyB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00372-BSU02110___ybyB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00372-BSU02110___ybyB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00372
# 2: BSU02110___ybyB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     229/261 (87.7%)
# Similarity:   229/261 (87.7%)
# Gaps:          30/261 (11.5%)
# Score: 1119.0
# 
#
#=======================================

BSNT_00372         1 ATGAAACAAAAGCTGTTACTTTCAGGTCTCGCTGTTTCAACTGTCGGCAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02110___yb      1 ATGAAACAAAAGCTGTTACTTTCAGGTCTCGCTGTTTCAACTGTCGGCAT     50

BSNT_00372        51 CACTTCTTATCTATTAAAAGACCCGTCAAATCGCCAAAAGGCAAGAGAAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02110___yb     51 CACTTCTTATCTATTAAAAGACCCGTCAAATCGCCAAAAGGCAAGAGAAT    100

BSNT_00372       101 TCATTCACAGCATGAAGATGAAAATAACAAAACAGCCAGACATGGAAACG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02110___yb    101 TCATTCACAGCATGAAGATGAAAATAACAAAACAGCCAGACATGGAAACG    150

BSNT_00372       151 TTCCCAGTTGATAAAGCCGGCCACCCTGACCCGCAAGATA----------    190
                     ||||||||||||||||||||||||||.|||||||||||||          
BSU02110___yb    151 TTCCCAGTTGATAAAGCCGGCCACCCGGACCCGCAAGATATCGAGGACAA    200

BSNT_00372       191 -------GTTTCAGAAGGCTCCATGTATCCCGTCCAATACTACGATGA--    231
                            ||.||||||||||||||||||||||||||||||||||||||  
BSU02110___yb    201 CAAAATGGTATCAGAAGGCTCCATGTATCCCGTCCAATACTACGATGAAA    250

BSNT_00372       231 -----------    231
                                
BSU02110___yb    251 AAAAGAAGTAA    261


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