Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_00370 and BSU02090

See Amino acid alignment / Visit BSNT_00370 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:25
# Commandline: needle
#    -asequence dna-align/BSNT_00370___ybxI.1.22522.seq
#    -bsequence dna-align/BSU02090___ybxI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00370___ybxI-BSU02090___ybxI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00370___ybxI-BSU02090___ybxI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00370___ybxI
# 2: BSU02090___ybxI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 885
# Identity:     789/885 (89.2%)
# Similarity:   789/885 (89.2%)
# Gaps:          81/885 ( 9.2%)
# Score: 3885.0
# 
#
#=======================================

BSNT_00370___      1 GTGCCTTTTGATTATTTTTTAAAGGAAGAACAAACGAAAGAGAGAGAAAA     50
                                                                       
BSU02090___yb      0 --------------------------------------------------      0

BSNT_00370___     51 GGTAGTTAATCAAAACGAAGGGGAGAACAAAATGAAAAAATGGATATATG    100
                                                    |||||||||||||||||||
BSU02090___yb      1 -------------------------------ATGAAAAAATGGATATATG     19

BSNT_00370___    101 TTGTGCTTGTGCTGAGTATTGCAGGGATCGGCGGCTTCTCCGTCCACGCA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02090___yb     20 TTGTGCTTGTGCTGAGTATTGCAGGGATCGGCGGCTTCTCCGTCCACGCA     69

BSNT_00370___    151 GCGTCATCTGCTCATGAAAAACACTTGAATGTCAGCAGAATGAATGTCGA    200
                     ||.||||||||||||||||||||||||||||||||||.||||||||||||
BSU02090___yb     70 GCATCATCTGCTCATGAAAAACACTTGAATGTCAGCAAAATGAATGTCGA    119

BSNT_00370___    201 TGATGAATTCAAGGATACGGATGGAACCTTCATTCTTCACGATTTACAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02090___yb    120 TGATGAATTCAAGGATACGGATGGAACCTTCATTCTTCACGATTTACAAA    169

BSNT_00370___    251 AGGAGCAGACATTTGTCTATAACAGAAAACGGGCAAATCAAAGACAAACT    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU02090___yb    170 AGGATCAGACATTTGTCTATAACAGAAAACGGGCAAATCAAAGACAAACT    219

BSNT_00370___    301 CCGCAATCCACCTTTAAAGTCGTGAACGCTTTAATCGGTTTGCAGGTCAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02090___yb    220 CCGCAATCCACCTTTAAAGTCGTGAACGCTTTAATCGGTTTGCAGGTCAA    269

BSNT_00370___    351 AGCTGTAAGAGATGAATACGATGTTAAACGATGGGACGGGGTCAAGCGTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02090___yb    270 AGCTGTAAGAGATGAATACGATGTTAAACGATGGGACGGGGTCAAGCGTG    319

BSNT_00370___    401 AATTCGAATCATGGAACCGCGACCATACGCTTGGCTCGGCCATGCGCGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02090___yb    320 AATTCGAATCATGGAACCGCGACCATACGCTTGGCTCGGCCATGCGCGAA    369

BSNT_00370___    451 TCCGCAATCTGGTATTATCAGGCATTAGCGAGAGATATCGGCGAGGAAAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02090___yb    370 TCCGCAATCTGGTATTATCAGGCATTAGCGAGAGATATCGGCGAGGAAAG    419

BSNT_00370___    501 GATGAAATCATGGCTTCATACACTATCTTACGGCAACGAGGATATCAGCG    550
                     .||||||.|||||||||||||.||||||||||||||||||||||||||||
BSU02090___yb    420 AATGAAAACATGGCTTCATACTCTATCTTACGGCAACGAGGATATCAGCG    469

BSNT_00370___    551 GGGGAATCGACCAGTTTTGGCTGCAAAGCTCGCTCACAATATCTCCGCTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02090___yb    470 GGGGAATCGACCAGTTTTGGCTGCAAAGCTCGCTCACAATATCTCCGCTG    519

BSNT_00370___    601 GAACAAGAAACCTTTTTGGAGAAACTATTTAAAGAGGAGCTTCCATTTGA    650
                     |||||||||||.||||||||||||||...|||||||||||||||||||||
BSU02090___yb    520 GAACAAGAAACTTTTTTGGAGAAACTGGCTAAAGAGGAGCTTCCATTTGA    569

BSNT_00370___    651 CAAACCGGTGATGAAAACCGTCAAGCGCATGATGATTCAAGAGGAAGGCG    700
                     |||.|||||||||||||.||||||||||||||||||||||||||||||||
BSU02090___yb    570 CAAGCCGGTGATGAAAATCGTCAAGCGCATGATGATTCAAGAGGAAGGCG    619

BSNT_00370___    701 ATCATTACACGCTCTACGGGAAAACCGGAACTCGCCTGACTGATATGGGA    750
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU02090___yb    620 ATCATTACACGCTCTACGGGAAAACCGGAACCCGCCTGACTGATATGGGA    669

BSNT_00370___    751 TTAGGATGGTTTGTCGGATTCATCAAAACAGAGCATGGCTCTTATGTCTT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02090___yb    670 TTAGGATGGTTTGTCGGATTCATCAAAACAGAGCATGGCTCTTATGTCTT    719

BSNT_00370___    801 TGTCACCAATGTCGATGATTCCGGCACAAAAGCCAAAAACATCACCGTAG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU02090___yb    720 TGTCACCAATGTCGATGATTCCGGCACAAAAGCCAAAAACATCACCGTGG    769

BSNT_00370___    851 ATATCCTGAAAAAGTATGGCCTGATCACATCCTAA    885
                     |||||||||||||||||||||||||.|||||||||
BSU02090___yb    770 ATATCCTGAAAAAGTATGGCCTGATTACATCCTAA    804


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.