Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00363 and BSU02040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:25
# Commandline: needle
# -asequence dna-align/BSNT_00363___ybdN.1.22522.seq
# -bsequence dna-align/BSU02040___ybdN.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00363___ybdN-BSU02040___ybdN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00363___ybdN-BSU02040___ybdN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00363___ybdN
# 2: BSU02040___ybdN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 858
# Identity: 833/858 (97.1%)
# Similarity: 833/858 (97.1%)
# Gaps: 0/858 ( 0.0%)
# Score: 4065.0
#
#
#=======================================
BSNT_00363___ 1 ATGGTGAAAAAATGGCTTATTCCATTCGCTGTTATGCTGTCTGTCTTATT 50
||||||||||||||||||||||.|||||||||||||||.||||||||||.
BSU02040___yb 1 ATGGTGAAAAAATGGCTTATTCAATTCGCTGTTATGCTTTCTGTCTTATC 50
BSNT_00363___ 51 CACCTTTACGTATTCGGCATCAGCTGCCGGAGTCACTGCTATCACAGGAA 100
.|||||||||||||||||||||||||.|||||||||||||||||||||||
BSU02040___yb 51 TACCTTTACGTATTCGGCATCAGCTGTCGGAGTCACTGCTATCACAGGAA 100
BSNT_00363___ 101 ACAATTCATTTGATACCGCAATGCCGATCGGTTATTGGAAATATAAAAAT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02040___yb 101 ACAATTCATTTGATACCGCAATGCCGATCGGTTATTGGAAATATAAAAAT 150
BSNT_00363___ 151 ATCGATACAACAATACTGGAAGCTGGTCAAGATGAAGCCTATTTCACTTT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02040___yb 151 ATCGATACAACAATACTGGAAGCTGGTCAAGATGAAGCCTATTTCACTTT 200
BSNT_00363___ 201 TACAGCTAATAAGGGAGAAAAAGTATACGTGAGGAGTACATACCAGAGCG 250
|||.||||||||||||||||||||||||.|||||||||||||||||||||
BSU02040___yb 201 TACGGCTAATAAGGGAGAAAAAGTATACATGAGGAGTACATACCAGAGCG 250
BSNT_00363___ 251 CGTATACAGGGATGAAAATTGAAATTTATGATAAGAATAGAATACCTGTT 300
|||||||||||||||||||||||||||||||.|||||.||||||||||||
BSU02040___yb 251 CGTATACAGGGATGAAAATTGAAATTTATGACAAGAACAGAATACCTGTT 300
BSNT_00363___ 301 TCTCAAGGGACAGAAGTCATTAACCCTAATACGTTTTCTTCTTTTATTTA 350
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU02040___yb 301 TCTCAAGGGACAGAAGTTATTAACCCTAATACGTTTTCTTCTTTTATTTA 350
BSNT_00363___ 351 TGCAAATGCAGACGCCCAAAACACGACGGATACCTTTTATGTGAAAGTGT 400
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU02040___yb 351 TGCAAATGCAGACGCCCAAAACACGACGGATACCTTCTATGTGAAAGTGT 400
BSNT_00363___ 401 CACGAGGCACCTATACCGGAAACATGTATTTTACACTTTCAATTGAAGAC 450
||||||||||||||||.|||||||||||.|||||.|||||||||||||||
BSU02040___yb 401 CACGAGGCACCTATACTGGAAACATGTACTTTACGCTTTCAATTGAAGAC 450
BSNT_00363___ 451 CGAATCAAATCAGGCAGCGGAACATTCCAATTCAGCGGCGCTGCTGAAAA 500
|||||||||||||||||||||||.||||||||||||||||.|||||||||
BSU02040___yb 451 CGAATCAAATCAGGCAGCGGAACGTTCCAATTCAGCGGCGTTGCTGAAAA 500
BSNT_00363___ 501 TAAAGGAAATACAAGCCTTAGCCCCTCAGGTTCTGATTCCAGCGTGATCA 550
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU02040___yb 501 TAAAGGAAATACAAGCCTTAGCCCCTCAGGTTCTGACTCCAGCGTGATCA 550
BSNT_00363___ 551 AGGTTGATTTAACAAACCAATCCGGGATACCGCGTGATGCCATTGTAACC 600
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU02040___yb 551 AGGTTGATTTAACAAACCAATCTGGGATACCGCGTGATGCCATTGTAACC 600
BSNT_00363___ 601 AGAGTTCAGACAACCGCCACTCAAACACCAAGCCAGGGAAATACACGCCA 650
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU02040___yb 601 AGAGTTCAAACAACCGCCACTCAAACACCAAGCCAGGGAAATACACGCCA 650
BSNT_00363___ 651 CCTGATCATGACGAGCGAAAACAACGAATGGCGCCGTGCTCTTGTAAACA 700
.|||||||||||.||||||||.|||||||||.|||||||.||||||||||
BSU02040___yb 651 TCTGATCATGACAAGCGAAAATAACGAATGGAGCCGTGCCCTTGTAAACA 700
BSNT_00363___ 701 GCTCGACTTCAGGGTCTTATGATATCTCTTTGTCAGATCAACTCAGTGTG 750
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU02040___yb 701 GCTCGACTTCAGGGTCTTATGATATCTCTTTGTCGGATCAACTCAGTGTG 750
BSNT_00363___ 751 GCAAAGGTATGGAGTTTTAAATATAATACATTAGCGACAGCCAGATCGAC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02040___yb 751 GCAAAGGTATGGAGTTTTAAATATAATACATTAGCGACAGCCAGATCGAC 800
BSNT_00363___ 801 GATGAGCAACGTAAAAGCAAAAATAGATTATGAATACGACGTGACAAAGC 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02040___yb 801 GATGAGCAACGTAAAAGCAAAAATAGATTATGAATACGACGTGACAAAGC 850
BSNT_00363___ 851 AGTTTTAA 858
||||||||
BSU02040___yb 851 AGTTTTAA 858
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