Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00363 and BSU02040

See Amino acid alignment / Visit BSNT_00363 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:25
# Commandline: needle
#    -asequence dna-align/BSNT_00363___ybdN.1.22522.seq
#    -bsequence dna-align/BSU02040___ybdN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00363___ybdN-BSU02040___ybdN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00363___ybdN-BSU02040___ybdN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00363___ybdN
# 2: BSU02040___ybdN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 858
# Identity:     833/858 (97.1%)
# Similarity:   833/858 (97.1%)
# Gaps:           0/858 ( 0.0%)
# Score: 4065.0
# 
#
#=======================================

BSNT_00363___      1 ATGGTGAAAAAATGGCTTATTCCATTCGCTGTTATGCTGTCTGTCTTATT     50
                     ||||||||||||||||||||||.|||||||||||||||.||||||||||.
BSU02040___yb      1 ATGGTGAAAAAATGGCTTATTCAATTCGCTGTTATGCTTTCTGTCTTATC     50

BSNT_00363___     51 CACCTTTACGTATTCGGCATCAGCTGCCGGAGTCACTGCTATCACAGGAA    100
                     .|||||||||||||||||||||||||.|||||||||||||||||||||||
BSU02040___yb     51 TACCTTTACGTATTCGGCATCAGCTGTCGGAGTCACTGCTATCACAGGAA    100

BSNT_00363___    101 ACAATTCATTTGATACCGCAATGCCGATCGGTTATTGGAAATATAAAAAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02040___yb    101 ACAATTCATTTGATACCGCAATGCCGATCGGTTATTGGAAATATAAAAAT    150

BSNT_00363___    151 ATCGATACAACAATACTGGAAGCTGGTCAAGATGAAGCCTATTTCACTTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02040___yb    151 ATCGATACAACAATACTGGAAGCTGGTCAAGATGAAGCCTATTTCACTTT    200

BSNT_00363___    201 TACAGCTAATAAGGGAGAAAAAGTATACGTGAGGAGTACATACCAGAGCG    250
                     |||.||||||||||||||||||||||||.|||||||||||||||||||||
BSU02040___yb    201 TACGGCTAATAAGGGAGAAAAAGTATACATGAGGAGTACATACCAGAGCG    250

BSNT_00363___    251 CGTATACAGGGATGAAAATTGAAATTTATGATAAGAATAGAATACCTGTT    300
                     |||||||||||||||||||||||||||||||.|||||.||||||||||||
BSU02040___yb    251 CGTATACAGGGATGAAAATTGAAATTTATGACAAGAACAGAATACCTGTT    300

BSNT_00363___    301 TCTCAAGGGACAGAAGTCATTAACCCTAATACGTTTTCTTCTTTTATTTA    350
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU02040___yb    301 TCTCAAGGGACAGAAGTTATTAACCCTAATACGTTTTCTTCTTTTATTTA    350

BSNT_00363___    351 TGCAAATGCAGACGCCCAAAACACGACGGATACCTTTTATGTGAAAGTGT    400
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU02040___yb    351 TGCAAATGCAGACGCCCAAAACACGACGGATACCTTCTATGTGAAAGTGT    400

BSNT_00363___    401 CACGAGGCACCTATACCGGAAACATGTATTTTACACTTTCAATTGAAGAC    450
                     ||||||||||||||||.|||||||||||.|||||.|||||||||||||||
BSU02040___yb    401 CACGAGGCACCTATACTGGAAACATGTACTTTACGCTTTCAATTGAAGAC    450

BSNT_00363___    451 CGAATCAAATCAGGCAGCGGAACATTCCAATTCAGCGGCGCTGCTGAAAA    500
                     |||||||||||||||||||||||.||||||||||||||||.|||||||||
BSU02040___yb    451 CGAATCAAATCAGGCAGCGGAACGTTCCAATTCAGCGGCGTTGCTGAAAA    500

BSNT_00363___    501 TAAAGGAAATACAAGCCTTAGCCCCTCAGGTTCTGATTCCAGCGTGATCA    550
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU02040___yb    501 TAAAGGAAATACAAGCCTTAGCCCCTCAGGTTCTGACTCCAGCGTGATCA    550

BSNT_00363___    551 AGGTTGATTTAACAAACCAATCCGGGATACCGCGTGATGCCATTGTAACC    600
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU02040___yb    551 AGGTTGATTTAACAAACCAATCTGGGATACCGCGTGATGCCATTGTAACC    600

BSNT_00363___    601 AGAGTTCAGACAACCGCCACTCAAACACCAAGCCAGGGAAATACACGCCA    650
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU02040___yb    601 AGAGTTCAAACAACCGCCACTCAAACACCAAGCCAGGGAAATACACGCCA    650

BSNT_00363___    651 CCTGATCATGACGAGCGAAAACAACGAATGGCGCCGTGCTCTTGTAAACA    700
                     .|||||||||||.||||||||.|||||||||.|||||||.||||||||||
BSU02040___yb    651 TCTGATCATGACAAGCGAAAATAACGAATGGAGCCGTGCCCTTGTAAACA    700

BSNT_00363___    701 GCTCGACTTCAGGGTCTTATGATATCTCTTTGTCAGATCAACTCAGTGTG    750
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU02040___yb    701 GCTCGACTTCAGGGTCTTATGATATCTCTTTGTCGGATCAACTCAGTGTG    750

BSNT_00363___    751 GCAAAGGTATGGAGTTTTAAATATAATACATTAGCGACAGCCAGATCGAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02040___yb    751 GCAAAGGTATGGAGTTTTAAATATAATACATTAGCGACAGCCAGATCGAC    800

BSNT_00363___    801 GATGAGCAACGTAAAAGCAAAAATAGATTATGAATACGACGTGACAAAGC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02040___yb    801 GATGAGCAACGTAAAAGCAAAAATAGATTATGAATACGACGTGACAAAGC    850

BSNT_00363___    851 AGTTTTAA    858
                     ||||||||
BSU02040___yb    851 AGTTTTAA    858


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