Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00358 and BSU02000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:24
# Commandline: needle
# -asequence dna-align/BSNT_00358.1.22522.seq
# -bsequence dna-align/BSU02000___ybdJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00358-BSU02000___ybdJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00358-BSU02000___ybdJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00358
# 2: BSU02000___ybdJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 682
# Identity: 327/682 (47.9%)
# Similarity: 327/682 (47.9%)
# Gaps: 347/682 (50.9%)
# Score: 1526.0
#
#
#=======================================
BSNT_00358 0 -------------------------------------------------- 0
BSU02000___yb 1 ATGAAGGGTTATCGTATTTTAATCGTTGAGGACGATGTGATGATTGGTGA 50
BSNT_00358 0 -------------------------------------------------- 0
BSU02000___yb 51 TTTGCTGCAAAAGATTTTGCAGCGCGAGGGATATCGTGTGATATGGAAAA 100
BSNT_00358 0 -------------------------------------------------- 0
BSU02000___yb 101 CAGATGGAGCGGATGTGCTTTCGGTGATTCAGAAGGTGGATTTGGTCATT 150
BSNT_00358 0 -------------------------------------------------- 0
BSU02000___yb 151 ATGGATGTGATGCTGCCGGGTGAAGACGGGTATCAAATGTCTGCAAAAAT 200
BSNT_00358 0 -------------------------------------------------- 0
BSU02000___yb 201 CAAAAAGCTGGGGCTGGGCATTCCGGTTATTTTTCTCTCAGCCCGCAATG 250
BSNT_00358 0 -------------------------------------------------- 0
BSU02000___yb 251 ACATGGACAGCAAGCTTCAAGGTTTGCAGATCGGCGAGGATTATATGGTA 300
BSNT_00358 1 -------TTG----------------TTTTACACT------TATG----- 16
||| .||.|.|.| ||||
BSU02000___yb 301 AAGCCCTTTGATCCGAGAGAGCTGCTATTAAGAATGCGGAATATGCTTGA 350
BSNT_00358 17 GCATCATTGAT---AACTTTTATTCATATACGCAAATCAAACATTTGTAT 63
|||||||| || |.||| ||||||||||||||||||||||
BSU02000___yb 351 GCATCATT-ATGGGACCTT---------TACGCAAATCAAACATTTGTAT 390
BSNT_00358 64 ATTGATGCAGTAACGAAAAAAGTGTTCAATGAAAGCCTGCATGATGAGGT 113
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU02000___yb 391 ATTGATGCGGTAACGAAAAAAGTGTTCAATGAAAGCCTGCATGATGAGGT 440
BSNT_00358 114 ATTGTTTACTGCGATTGAGCGGAAAATTTTCTTTTATTTATATGAAAATA 163
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU02000___yb 441 ATTATTTACTGCGATTGAGCGGAAAATTTTCTTTTATTTATATGAAAATA 490
BSNT_00358 164 GAGACAGTATCCTGACAAAGGAACATTTCTTTGAATATCTATGGCAGCTC 213
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02000___yb 491 GAGACAGTATCCTGACAAAGGAACATTTCTTTGAATATCTATGGCAGCTC 540
BSNT_00358 214 GAAGATAGAAACCCGAATATTGTCAATGTGCATATTAAAAAAATCAGAGC 263
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU02000___yb 541 GAAGATAGAAACCCGAATATTGTCAATGTGCATATTAAAAAAATTAGAGC 590
BSNT_00358 264 TAAAATCAATGATCAAGCGGGTGAGATGATTGAAAATATATATGGAGAAG 313
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02000___yb 591 TAAAATCAATGATCAAGCGGGTGAGATGATTGAAAATATATATGGAGAAG 640
BSNT_00358 314 GGTATCGGCTGAATACCGTTGTGAAGAAATGA 345
||||||||||||||||||||||||||||||||
BSU02000___yb 641 GGTATCGGCTGAATACCGTTGTGAAGAAATGA 672
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