Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00355 and BSU01860

See Amino acid alignment / Visit BSNT_00355 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:24
# Commandline: needle
#    -asequence dna-align/BSNT_00355___ybcF.1.22522.seq
#    -bsequence dna-align/BSU01860___ybcF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00355___ybcF-BSU01860___ybcF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00355___ybcF-BSU01860___ybcF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00355___ybcF
# 2: BSU01860___ybcF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 528
# Identity:     517/528 (97.9%)
# Similarity:   517/528 (97.9%)
# Gaps:           0/528 ( 0.0%)
# Score: 2541.0
# 
#
#=======================================

BSNT_00355___      1 ATGAATGTAATCCAAAATAAAAAAGTATTGTTTTTGACGGATATTGAAAA     50
                     ||||||||||.||||||||||||||||||.||||||||||||||||||||
BSU01860___yb      1 ATGAATGTAAACCAAAATAAAAAAGTATTATTTTTGACGGATATTGAAAA     50

BSNT_00355___     51 CGGTTTGGAGCCTATTTTACAAGAAGCAACTAACACTTCTGCAGAGAATA    100
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU01860___yb     51 CGGTTTGGAGCCTATTTTACAAGAAGCGACTAACACTTCTGCAGAGAATA    100

BSNT_00355___    101 TGTTGACTATACAAAGCTATGGTGCCAGTATTTCACATCCTTATGGAGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01860___yb    101 TGTTGACTATACAAAGCTATGGTGCCAGTATTTCACATCCTTATGGAGAA    150

BSNT_00355___    151 ATCATGAGGTCTGTTATTTTTGCGATTTACCAGGAAGATGTTGAGGAGAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01860___yb    151 ATCATGAGGTCTGTTATTTTTGCGATTTACCAGGAAGATGTTGAGGAGAT    200

BSNT_00355___    201 TTTTGTAGTAGGAACAAAAGACAAGAAGACTTCCGCAGGTAATGGACTAA    250
                     |||||||||||||||||||||.|||||||||||.||||||||||||||||
BSU01860___yb    201 TTTTGTAGTAGGAACAAAAGATAAGAAGACTTCTGCAGGTAATGGACTAA    250

BSNT_00355___    251 CTCAACTTGAAACAATGAAAGATAAAATACAAACATTGGATTATCTCTTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU01860___yb    251 CTCAACTTGAAACAATGAAAGATAAAATACAAACATTGGATTATCTGTTT    300

BSNT_00355___    301 CAAAATTGCAAGCCTGAATTTTTAGGTGGTACGGTCGATGAATGGCTAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01860___yb    301 CAAAATTGCAAGCCTGAATTTTTAGGTGGTACGGTCGATGAATGGCTAAA    350

BSNT_00355___    351 TGAAAATAGCAGTGACACCATTGAAAAAAGTGTTGATATGATTCGACATC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01860___yb    351 TGAAAATAGCAGTGACACCATTGAAAAAAGTGTTGATATGATTCGACATC    400

BSNT_00355___    401 ATCCCCTAGTGCCGTCATATGTTAAAGTTAGAGGTTTATTCGTTCATCAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU01860___yb    401 ATCCCCTAGTGCCGTCATATGTTAAAGTTAGAGGTTTATTCGTTAATCAT    450

BSNT_00355___    451 AAGGATGGAAAACCCTCAATCGTGGAGGTTCCTGATGTTAAAACAGGTCA    500
                     ||||.|||||||||||||||||.|||||||||||||||||||||||||||
BSU01860___yb    451 AAGGGTGGAAAACCCTCAATCGCGGAGGTTCCTGATGTTAAAACAGGTCA    500

BSNT_00355___    501 AGCCTTACCTGATCATTGCTTGTCATGA    528
                     ||||.|.|||||||||||||||||||||
BSU01860___yb    501 AGCCATGCCTGATCATTGCTTGTCATGA    528


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