Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00350 and BSU01800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:22
# Commandline: needle
# -asequence dna-align/BSNT_00350.1.22522.seq
# -bsequence dna-align/BSU01800___alkA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00350-BSU01800___alkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00350-BSU01800___alkA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00350
# 2: BSU01800___alkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 912
# Identity: 531/912 (58.2%)
# Similarity: 531/912 (58.2%)
# Gaps: 378/912 (41.4%)
# Score: 2643.0
#
#
#=======================================
BSNT_00350 1 GTGGCATGGCATGAAGTCAATGATGTTATTGTCATTACATTACCTGAAAT 50
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU01800___al 1 GTGACATGGCATGAAGTCAATGATGTTATTGTCATTACATTACCTGAAAT 50
BSNT_00350 51 TTTCGACATGAATGCGAACCTAGGCTACCTAACCAGGGAAAAAAATGAAT 100
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU01800___al 51 TTTCGACATGAATGCGAACCTTGGCTACCTAACCAGGGAAAAAAATGAAT 100
BSNT_00350 101 GCATGTATGAAATAGAGAACAATATCATTACAAAAGTTATAGCCATTGGG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01800___al 101 GCATGTATGAAATAGAGAACAATATCATTACAAAAGTTATAGCCATTGGG 150
BSNT_00350 151 GAAATTCGGTCCTTAGTGCAGGTAAGCGTAATCAATAATAAACAAATGAT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01800___al 151 GAAATTCGGTCCTTAGTGCAGGTAAGCGTAATCAATAATAAACAAATGAT 200
BSNT_00350 201 TGTTCAATTCCTAAACGATTCTAGACCTGTTGAGCAGTGGAAACGGGAAG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01800___al 201 TGTTCAATTCCTAAACGATTCTAGACCTGTTGAGCAGTGGAAACGGGAAG 250
BSNT_00350 251 AGATTGTAAAATATATTCATGAATGGTTTGATCTTGATAACGATTTAACT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01800___al 251 AGATTGTAAAATATATTCATGAATGGTTTGATCTTGATAACGATTTAACT 300
BSNT_00350 301 CCATTTTATGAAATGGCAAAAGCAGATCCATTACTTAAAATGCCTGCCCG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01800___al 301 CCATTTTATGAAATGGCAAAAGCAGATCCATTACTTAAAATGCCTGCCCG 350
BSNT_00350 351 AAAATTTTATGGGTTGCGAGTGATCGGCATTCCCGATTTATTTGAAGCTT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01800___al 351 AAAATTTTATGGGTTGCGAGTGATCGGCATTCCCGATTTATTTGAAGCTT 400
BSNT_00350 401 TATGTTGGGGAGTTTTAGGGCAACAAATTAACTTAGCCTTCGCGTACTCC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01800___al 401 TATGTTGGGGAGTTTTAGGGCAACAAATTAACTTAGCCTTCGCGTACTCC 450
BSNT_00350 451 TTAAAGAAGCAATTTGTAGAAGCATTTGGCGATTCTATTGAATGGAATGG 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01800___al 451 TTAAAGAAGCAATTTGTAGAAGCATTTGGCGATTCTATTGAATGGAATGG 500
BSNT_00350 501 TAAAAAGTATTGGGTGTTCCCACCGTACGAGTGA---------------- 534
|||||||||||||||||||||||||||||||.||
BSU01800___al 501 TAAAAAGTATTGGGTGTTCCCACCGTACGAGCGAATTGCACGGTTAACCC 550
BSNT_00350 534 -------------------------------------------------- 534
BSU01800___al 551 CTACCGACCTGGCAGATATTAAAATGACGGTGAAAAAAAGTGAATATATC 600
BSNT_00350 534 -------------------------------------------------- 534
BSU01800___al 601 ATTGGAATAGCCAGATTAATGGCAAGTGGAGAATTATCGAGGGAAAAATT 650
BSNT_00350 534 -------------------------------------------------- 534
BSU01800___al 651 AATGAAAATGAACTTTAAAGATGCTGAAAAAAACTTAATTAAAATACGAG 700
BSNT_00350 534 -------------------------------------------------- 534
BSU01800___al 701 GAATCGGTCCTTGGACAGCCAATTATGTTCTAATGCGCTGCCTTAGGTTC 750
BSNT_00350 534 -------------------------------------------------- 534
BSU01800___al 751 CCGACAGCTTTTCCAATCGATGATGTGGGTCTTATTCATTCGATAAAAAT 800
BSNT_00350 534 -------------------------------------------------- 534
BSU01800___al 801 ATTACGTAATATGAACCGAAAGCCTACGAAAGATGAAATCTTAGAAATAT 850
BSNT_00350 534 -------------------------------------------------- 534
BSU01800___al 851 CGGTTCCATGGAAAGAATGGCAATCATACGCTACCTTTTATTTATGGCGT 900
BSNT_00350 534 ------------ 534
BSU01800___al 901 GTCCTTTACTGA 912
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