Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00317 and BSU01660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:20
# Commandline: needle
# -asequence dna-align/BSNT_00317___ybbD.1.22522.seq
# -bsequence dna-align/BSU01660___ybbD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00317___ybbD-BSU01660___ybbD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00317___ybbD-BSU01660___ybbD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00317___ybbD
# 2: BSU01660___ybbD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1929
# Identity: 1902/1929 (98.6%)
# Similarity: 1902/1929 (98.6%)
# Gaps: 0/1929 ( 0.0%)
# Score: 9402.0
#
#
#=======================================
BSNT_00317___ 1 ATGAGACCTGTCTTTCCGCTTATCCTTTCAGCCGTTCTCTTTCTTTCATG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 1 ATGAGACCTGTCTTTCCGCTTATCCTTTCAGCCGTTCTCTTTCTTTCATG 50
BSNT_00317___ 51 CTTTTTCGGGGCCAGACAGACAGAAGCCTCTGCATCCAAACGTGCAATCG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 51 CTTTTTCGGGGCCAGACAGACAGAAGCCTCTGCATCCAAACGTGCAATCG 100
BSNT_00317___ 101 ATGCCAATCAGATTGTCAATCGTATGTCGTTAGATGAAAAACTCGGCCAG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 101 ATGCCAATCAGATTGTCAATCGTATGTCGTTAGATGAAAAACTCGGCCAG 150
BSNT_00317___ 151 ATGCTGATGCCTGATTTTAGAAATTGGCAAAAGGAAGGCGAGTCCTCTCC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 151 ATGCTGATGCCTGATTTTAGAAATTGGCAAAAGGAAGGCGAGTCCTCTCC 200
BSNT_00317___ 201 GCAAGCCCTTACAGAAATGAATGATGAAGTCGCCAGCCTCGTCAAGAAAT 250
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU01660___yb 201 GCAAGCCCTTACAAAAATGAATGATGAAGTCGCCAGCCTCGTCAAGAAAT 250
BSNT_00317___ 251 ATCAATTCGGAGGCATCATCCTTTTTGCAGAAAATGTAAAAACAACAAAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 251 ATCAATTCGGAGGCATCATCCTTTTTGCAGAAAATGTAAAAACAACAAAA 300
BSNT_00317___ 301 CAAACTGTCCAACTGACAGACGATTACCAAAAGGCAAGTCCAAAAATCCC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 301 CAAACTGTCCAACTGACAGACGATTACCAAAAGGCAAGTCCAAAAATCCC 350
BSNT_00317___ 351 GCTCATGCTGAGTATTGATCAGGAAGGCGGCATTGTAACGCGGTTAGGGG 400
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU01660___yb 351 GCTCATGCTGAGTATTGATCAGGAAGGCGGCATTGTAACGAGGTTAGGGG 400
BSNT_00317___ 401 AGGGCACTAATTTCCCAGGGAATATGGCACTGGGCGCAGCCAGAAGCAGA 450
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU01660___yb 401 AGGGCACTAATTTCCCAGGGAATATGGCGCTGGGCGCAGCCAGAAGCAGA 450
BSNT_00317___ 451 ATCAATGCGTATCAGACCGGCAGCATCATCGGGAAAGAGCTCTCTGCCTT 500
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU01660___yb 451 ATCAATGCGTATCAGACCGGCAGCATCATCGGAAAAGAGCTCTCTGCCTT 500
BSNT_00317___ 501 AGGCATCAATACAGATTTCAGCCCTGTCGTGGACATTAACAATAATCCTA 550
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU01660___yb 501 AGGCATCAATACAGATTTCAGCCCTGTCGTGGACATTAACAATAATCCTG 550
BSNT_00317___ 551 ATAATCCTGTAATCGGCGTACGGTCATTCAGCTCCAATCGAGAACTGACA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 551 ATAATCCTGTAATCGGCGTACGGTCATTCAGCTCCAATCGAGAACTGACA 600
BSNT_00317___ 601 TCACGCCTCGGTTTATACACGATGAAAGGGTTGCAGCGGCAGGATATCGC 650
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU01660___yb 601 TCACGCCTCGGTTTATATACGATGAAAGGGTTGCAGCGGCAGGATATCGC 650
BSNT_00317___ 651 GTCTGCCCTCAAACATTTCCCGGGACATGGAGACACGGACGTTGACAGCC 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 651 GTCTGCCCTCAAACATTTCCCGGGACATGGAGACACGGACGTTGACAGCC 700
BSNT_00317___ 701 ATTATGGACTGCCGCTCGTTTCCCATGGCCAAGAACGGCTTCGTGAGGTC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 701 ATTATGGACTGCCGCTCGTTTCCCATGGCCAAGAACGGCTTCGTGAGGTC 750
BSNT_00317___ 751 GAGCTTTATCCTTTTCAAAAAGCAATTGATGCTGGTGCTGATATGGTGAT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 751 GAGCTTTATCCTTTTCAAAAAGCAATTGATGCTGGTGCTGATATGGTGAT 800
BSNT_00317___ 801 GACAGCCCATGTTCAGTTTCCCGCCTTTGATGACACCACTTACAAAAGCA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 801 GACAGCCCATGTTCAGTTTCCCGCCTTTGATGACACCACTTACAAAAGCA 850
BSNT_00317___ 851 AACTCGATGGATCGGACATTTTGGTTCCAGCTACACTTTCAAAAAAAGTG 900
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU01660___yb 851 AACTCGATGGATCGGACATTCTGGTTCCAGCTACACTTTCAAAAAAAGTG 900
BSNT_00317___ 901 ATGACAGGTCTTCTTCGTCAGGAAATGGGCTTTAATGGTGTGATCGTTAC 950
||||||||||||||||||||||||||||||||||||||.||.||||||||
BSU01660___yb 901 ATGACAGGTCTTCTTCGTCAGGAAATGGGCTTTAATGGGGTCATCGTTAC 950
BSNT_00317___ 951 CGATGCACTCAATATGAAGGCAATCGCAGATCATTTCGGACAGGAAGAGG 1000
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 951 CGATGCGCTCAATATGAAGGCAATCGCAGATCATTTCGGACAGGAAGAGG 1000
BSNT_00317___ 1001 CTGTGGTCATGGCCGTAAGAGCTGGTGTCGATATTGCATTAATGCCAGCC 1050
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU01660___yb 1001 CTGTGGTCATGGCCGTAAAAGCTGGTGTCGATATTGCATTAATGCCAGCC 1050
BSNT_00317___ 1051 TCAGTCACTTCATTGAAAGAAGAACAGAAATTCGCACGTGTTATTCAAGC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 1051 TCAGTCACTTCATTGAAAGAAGAACAGAAATTCGCACGTGTTATTCAAGC 1100
BSNT_00317___ 1101 TTTGAAAGAAGCCGTGAAAAACGGGGATATTCCTGAACAACAAATCAACA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 1101 TTTGAAAGAAGCCGTGAAAAACGGGGATATTCCTGAACAACAAATCAACA 1150
BSNT_00317___ 1151 ATTCAGTTGAAAGAATCATTTCCCTGAAAATAAAACGCGGCATGTATCCA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 1151 ATTCAGTTGAAAGAATCATTTCCCTGAAAATAAAACGCGGCATGTATCCA 1200
BSNT_00317___ 1201 GCGCGAAACAGCGACAGTACAAAAGAAAAAATAGCCAAAGCCAAAAAAAT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 1201 GCGCGAAACAGCGACAGTACAAAAGAAAAAATAGCCAAAGCCAAAAAAAT 1250
BSNT_00317___ 1251 CGTAGGAAGCAAGCAGCACCTGAAAGCAGAGAAAAAAATAGCTGAAAAAG 1300
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU01660___yb 1251 CGTAGGAAGCAAGCAGCACCTGAAAGCAGAGAAAAAATTAGCTGAAAAAG 1300
BSNT_00317___ 1301 CAGTAACTGTATTAAAAAATGAACAGCACACTTTGCCATTCAAGCCTAAA 1350
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU01660___yb 1301 CAGTAACTGTATTAAAAAATGAACAGCACACTTTGCCGTTCAAGCCTAAA 1350
BSNT_00317___ 1351 AAAGGCAGCCGAATCTTAATTGTGGCACCTTACGAAGAACAAACTGCTTC 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 1351 AAAGGCAGCCGAATCTTAATTGTGGCACCTTACGAAGAACAAACTGCTTC 1400
BSNT_00317___ 1401 AATCGAACAAACCATTCACGATCTCATCAAGCGAAAGAAAATCAAACCCG 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 1401 AATCGAACAAACCATTCACGATCTCATCAAGCGAAAGAAAATCAAACCCG 1450
BSNT_00317___ 1451 TATCTGTCGACAAAATGAATTTTGCCAACCAAGTATTTAAGGCCGAGCAT 1500
||||..||..|||||||||.|||||||.|||||||||||||.||||||||
BSU01660___yb 1451 TATCCCTCAGCAAAATGAACTTTGCCAGCCAAGTATTTAAGACCGAGCAT 1500
BSNT_00317___ 1501 GCAAAACAAGTAAAAAAGGCTGATTATATCATAACCGGCTCCTATGTCGT 1550
|.|||||||||||||.||||||||||||||||.|||||||||||||||||
BSU01660___yb 1501 GAAAAACAAGTAAAAGAGGCTGATTATATCATTACCGGCTCCTATGTCGT 1550
BSNT_00317___ 1551 CAAAAATGATCCTGTCGTCAACGACGGTGTCATCGACGACACAATATCAG 1600
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 1551 CAAAAATGACCCTGTCGTCAACGACGGTGTCATCGACGACACAATATCAG 1600
BSNT_00317___ 1601 ATTCAAGCAAATGGGCCACCGTGTTTCCGAGAGCTGTCATGAAAGCCGCA 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 1601 ATTCAAGCAAATGGGCCACCGTGTTTCCGAGAGCTGTCATGAAAGCCGCA 1650
BSNT_00317___ 1651 CTGCAGCACAACAAACCATTTGTCTTAATGAGCCTGCGCAACCCCTATGA 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 1651 CTGCAGCACAACAAACCATTTGTCTTAATGAGCCTGCGCAACCCCTATGA 1700
BSNT_00317___ 1701 CGCAGCCAATTTCGAAGAAACAAAGGCACTGATTGCAGTCTATGGCTTTA 1750
|||||||||||||||||||.||||.|||||||||||||||||||||||||
BSU01660___yb 1701 CGCAGCCAATTTCGAAGAAGCAAAAGCACTGATTGCAGTCTATGGCTTTA 1750
BSNT_00317___ 1751 AAGGATACGCAAATGGCCGTTATCTTCAACCTAATATTCCGGCCGGAGTG 1800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 1751 AAGGATACGCAAATGGCCGTTATCTTCAACCTAATATTCCGGCCGGAGTG 1800
BSNT_00317___ 1801 ATGGCGATATTCGGCCAGGCAAAACCTAAAGGCACACTTCCAGTTGACAT 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01660___yb 1801 ATGGCGATATTCGGCCAGGCAAAACCTAAAGGCACACTTCCAGTTGACAT 1850
BSNT_00317___ 1851 TCCGTCAGTCACGAAACCAGGGAACACCCTTTACCCATTTGGCTACGGAT 1900
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU01660___yb 1851 TCCGTCAGTCACGAAACCAGGGAACACCCTTTACCCACTTGGCTACGGAT 1900
BSNT_00317___ 1901 TAAATATCAAAACGGGAAGACCGCTTTAA 1929
|||||||||||||||||||||||||||||
BSU01660___yb 1901 TAAATATCAAAACGGGAAGACCGCTTTAA 1929
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