Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00265 and BSU01560

See Amino acid alignment / Visit BSNT_00265 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:18
# Commandline: needle
#    -asequence dna-align/BSNT_00265.1.22522.seq
#    -bsequence dna-align/BSU01560___kbaA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00265-BSU01560___kbaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00265-BSU01560___kbaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00265
# 2: BSU01560___kbaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 669
# Identity:     591/669 (88.3%)
# Similarity:   591/669 (88.3%)
# Gaps:          72/669 (10.8%)
# Score: 2931.0
# 
#
#=======================================

BSNT_00265         1 ATGATTCATCTGTTTGGAATTATACATAACAAAATATCGCTGTTCGCGAT     50
                                                                       
BSU01560___kb      0 --------------------------------------------------      0

BSNT_00265        51 TTTTGAGGGGATGAATAAAGAAATGAAAAGCCGTGGTTTAGTTCGTTTTT    100
                                           ||||||||||||||||||||||||||||
BSU01560___kb      1 ----------------------ATGAAAAGCCGTGGTTTAGTTCGTTTTT     28

BSNT_00265       101 TCTTTTCTATTTTAGCTGTCGGAGCGCTTATCACGAGTATTGTGGGTTTT    150
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU01560___kb     29 TCTTTTCTATTTTAGCTGTCGGGGCGCTTATCACGAGTATTGTGGGTTTT     78

BSNT_00265       151 GCTTTAAAATGGGGAGAATATAGAGGGCTGTTTCTTACATTTGAAGCGGG    200
                     ||||||||.||||||||||||||||||||||||||.||||||||||||||
BSU01560___kb     79 GCTTTAAAGTGGGGAGAATATAGAGGGCTGTTTCTAACATTTGAAGCGGG    128

BSNT_00265       201 GCAGATTTTCTCTGTTTTATTTTGGTTTATCGGTGTAGGCATGATTTTCA    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU01560___kb    129 ACAGATTTTCTCTGTTTTATTTTGGTTTATCGGTGTAGGCATGATTTTCA    178

BSNT_00265       251 GTGTGATCAGCCAAATGGGTTTTTTCGTGTTTTTAACAGTTCATCGGTTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01560___kb    179 GTGTGATCAGCCAAATGGGTTTTTTCGTGTTTTTAACAGTTCATCGGTTT    228

BSNT_00265       301 GCGCTTGAGATATTAAGGTCCTCCTCTTTGTGGAATTTGCTGCAGTTGTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01560___kb    229 GCGCTTGAGATATTAAGGTCCTCCTCTTTGTGGAATTTGCTGCAGTTGTT    278

BSNT_00265       351 TTTCATCCTGTTTGTTGCTTTTGATTTAATGTACGTGCGTTTTTTATTTT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01560___kb    279 TTTCATCCTGTTTGTTGCTTTTGATTTAATGTACGTGCGTTTTTTATTTT    328

BSNT_00265       401 TTGGAGAGAGCGGAGAATCGCTGGCTGGCTATGCGTGGTTACCGATGTTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU01560___kb    329 TTGGAGAGAGCGGAGAATCGCTGGCTGGCTATGCGTGGTTACCGGTGTTT    378

BSNT_00265       451 TTATTGATCTTTGGAGTGATTACAGCTTATATAAAGCAAAAGCAGTCCTC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01560___kb    379 TTATTGATCTTTGGAGTGATTACAGCTTATATAAAGCAAAAGCAGTCCTC    428

BSNT_00265       501 TAAGAAAACATTTGTGTCATCGTTGTTTTTGATGGTTGTGATTACCGCAT    550
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU01560___kb    429 TAAGAAAACATTTGTGTCATCGTTATTTTTGATGGTTGTGATTACCGCAT    478

BSNT_00265       551 TAGAATGGTTCCCTGCATTAAGAGTAAATGATGAGGACTGGCTTTATTTA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01560___kb    479 TAGAATGGTTCCCTGCATTAAGAGTAAATGATGAGGACTGGCTTTATTTA    528

BSNT_00265       601 ATGCTTTTTCCGTTAATGGCATGTAATGCCTTCCAATTGCTGATGCTGCC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01560___kb    529 ATGCTTTTTCCGTTAATGGCATGTAATGCCTTCCAATTGCTGATGCTGCC    578

BSNT_00265       651 GAAGTTTGCAGCAAAGTAA    669
                     |||||||||||||||||||
BSU01560___kb    579 GAAGTTTGCAGCAAAGTAA    597


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