Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_00259 and BSU01510

See Amino acid alignment / Visit BSNT_00259 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:17
# Commandline: needle
#    -asequence dna-align/BSNT_00259___ybaJ.1.22522.seq
#    -bsequence dna-align/BSU01510___ybaJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00259___ybaJ-BSU01510___ybaJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00259___ybaJ-BSU01510___ybaJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00259___ybaJ
# 2: BSU01510___ybaJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 768
# Identity:     754/768 (98.2%)
# Similarity:   754/768 (98.2%)
# Gaps:           0/768 ( 0.0%)
# Score: 3714.0
# 
#
#=======================================

BSNT_00259___      1 ATGAATGCGTTAGTAGCTCATAATAGCAAAGCCTGGGATAAAAAAGTAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01510___yb      1 ATGAATGCGTTAGTAGCTCATAATAGCAAAGCCTGGGATAAAAAAGTAGA     50

BSNT_00259___     51 AACAGGCAATGAATGGACTGTTGCTGTTGAGCAGCAGGTGATCGAACAAG    100
                     ||||||||||||||||||||||||||||||.||||||||.||||||||||
BSU01510___yb     51 AACAGGCAATGAATGGACTGTTGCTGTTGAACAGCAGGTTATCGAACAAG    100

BSNT_00259___    101 CAAAAAAAGGCAATTGGGATATAAGGGTAACACCAATGAAAGATGTACCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01510___yb    101 CAAAAAAAGGCAATTGGGATATAAGGGTAACACCAATGAAAGATGTACCG    150

BSNT_00259___    151 AAGGATTGGTTTCCGCCTGTCAAAGGTCTGAAAGTACTCTGTTTAGCATC    200
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU01510___yb    151 AAGGATTGGTTTCCGCCTATCAAAGGTCTGAAAGTACTCTGTTTAGCATC    200

BSNT_00259___    201 AGGCGGCGGCCAGCAGGGCCCAGTTTTGGCAGCCGCAGGCGCGGATGTCA    250
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU01510___yb    201 AGGCGGCGGCCAGCAGGGTCCAGTTTTGGCAGCCGCAGGCGCGGATGTCA    250

BSNT_00259___    251 CCGTACTAGATAACTCAGAAAAACAGCTGAATCAGGATAAAATGATTGCT    300
                     |.|||.|||||||||||||||||||||||||||||||||.||||||||||
BSU01510___yb    251 CTGTATTAGATAACTCAGAAAAACAGCTGAATCAGGATAGAATGATTGCT    300

BSNT_00259___    301 GAGCGAGATGGTCTCACAATACACACTGTCAAAGGAAGCATGGACGATTT    350
                     ||||||||||||||.||.||||||||||||||||||||||||||||||||
BSU01510___yb    301 GAGCGAGATGGTCTGACGATACACACTGTCAAAGGAAGCATGGACGATTT    350

BSNT_00259___    351 AAGTGTATTTAATGATGAATCATTTGATGTCATTGTACATCCTGTTGCCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01510___yb    351 AAGTGTATTTAATGATGAATCATTTGATGTCATTGTACATCCTGTTGCCA    400

BSNT_00259___    401 ATGTTTTTGTTGAGAATGTCCTCCCGGTATGGAAGGAAGCGCACCGTGTG    450
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU01510___yb    401 ATGTTTTTGTTGAGAATGTCCTCCCGGTATGGAAGGAAGCGTACCGTGTG    450

BSNT_00259___    451 TTGAAAAGGAACGGCGTTCTAATCTCGGGTTTTGTCAATCCTGTTGTATT    500
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU01510___yb    451 TTGAAAAGGAACGGCATTCTAATCTCGGGTTTTGTCAATCCTGTTGTATT    500

BSNT_00259___    501 TCTGTTTGATACAGAATTAGAACAGCAAGGTGTTTTAAAAGTAAAACACT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01510___yb    501 TCTGTTTGATACAGAATTAGAACAGCAAGGTGTTTTAAAAGTAAAACACT    550

BSNT_00259___    551 CCATTCCATACGCTGACCCAGAAGATCTTCCGAAACATAAAGTGAAAAAA    600
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU01510___yb    551 CTATTCCATACGCTGACCCAGAAGATCTTCCGAAACATAAAGTGAAAAAA    600

BSNT_00259___    601 CTGATCGAAAATAATGAGGCTTTGGAATTCGGCCATTCCTTAGAAGACCA    650
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU01510___yb    601 CTGATCGAAAATAATGAGGCTCTGGAATTCGGCCATTCCTTAGAAGACCA    650

BSNT_00259___    651 AATCAAAGGCCAAATTGATGCCGGTTTTATCGTTACTGGTTTTTATGAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01510___yb    651 AATCAAAGGCCAAATTGATGCCGGTTTTATCGTTACTGGTTTTTATGAAG    700

BSNT_00259___    701 ATAAAGGCGGGTTTGTATTAGACCAATATATCCATACATATTCTGCAACA    750
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU01510___yb    701 ATAAAGGCGGTTTTGTATTAGACCAATATATCCATACATATTCTGCAACA    750

BSNT_00259___    751 AGAAGCGTGAAAGTATGA    768
                     ||||||||||||||||||
BSU01510___yb    751 AGAAGCGTGAAAGTATGA    768


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.