Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00252 and BSU01470

See Amino acid alignment / Visit BSNT_00252 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:16
# Commandline: needle
#    -asequence dna-align/BSNT_00252___ybaF.1.22522.seq
#    -bsequence dna-align/BSU01470___ybaF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00252___ybaF-BSU01470___ybaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00252___ybaF-BSU01470___ybaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00252___ybaF
# 2: BSU01470___ybaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 798
# Identity:     793/798 (99.4%)
# Similarity:   793/798 (99.4%)
# Gaps:           0/798 ( 0.0%)
# Score: 3945.0
# 
#
#=======================================

BSNT_00252___      1 ATGATGGACAGCATGATTATCGGCAAGTATGTACCGGGGACTTCACTTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01470___yb      1 ATGATGGACAGCATGATTATCGGCAAGTATGTACCGGGGACTTCACTTGT     50

BSNT_00252___     51 TCACCGGCTTGACCCCAGAACAAAACTGATCACGATCTTTTTATTTGTCT    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU01470___yb     51 GCACCGGCTTGACCCCAGAACAAAACTGATCACGATCTTTTTATTTGTCT    100

BSNT_00252___    101 GCATTGTATTCTTAGCCAATAATGTTCAGACATACGCGTTGCTTGGTTTA    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU01470___yb    101 GCATTGTATTCTTAGCCAATAATGTTCAGACATATGCGTTGCTTGGTTTA    150

BSNT_00252___    151 TTTACAATTGGCGTCGTTTCTTTAACAAGAGTTCCTTTCTCTTTTTTAAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01470___yb    151 TTTACAATTGGCGTCGTTTCTTTAACAAGAGTTCCTTTCTCTTTTTTAAT    200

BSNT_00252___    201 GAAAGGGCTGAAGCCAATCATCTGGATTGTCCTTTTTACGTTCCTTCTTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01470___yb    201 GAAAGGGCTGAAGCCAATCATCTGGATTGTCCTTTTTACGTTCCTTCTTC    250

BSNT_00252___    251 ACATCCTTATGACACATGAAGGACCGATTATCTTTCAAATAGGTTTTTTC    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU01470___yb    251 ACATTCTTATGACACATGAAGGACCGATTATCTTTCAAATAGGTTTTTTC    300

BSNT_00252___    301 AAAGTCTATGAGGGCGGTCTGGTTCAGGGGATATTCATTTCTCTTAGATT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01470___yb    301 AAAGTCTATGAGGGCGGTCTGGTTCAGGGGATATTCATTTCTCTTAGATT    350

BSNT_00252___    351 CGTCTATTTGATTTTAATCACAACTTTATTAACGCTTACGACCACACCGA    400
                     ||||||||||||||||||||||||.|||||||||||||||||.|||||||
BSU01470___yb    351 CGTCTATTTGATTTTAATCACAACCTTATTAACGCTTACGACTACACCGA    400

BSNT_00252___    401 TTGAGATTACCGATGGAATGGAGCAGCTGCTGAACCCATTGAAAAAATTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01470___yb    401 TTGAGATTACCGATGGAATGGAGCAGCTGCTGAACCCATTGAAAAAATTA    450

BSNT_00252___    451 AAGCTTCCTGTTCATGAGCTGGCTCTTATGATGTCAATTTCTTTACGGTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01470___yb    451 AAGCTTCCTGTTCATGAGCTGGCTCTTATGATGTCAATTTCTTTACGGTT    500

BSNT_00252___    501 TATTCCGACACTGATGGAGGAGACAGATAAGATCATGAAGGCTCAGATGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01470___yb    501 TATTCCGACACTGATGGAGGAGACAGATAAGATCATGAAGGCTCAGATGG    550

BSNT_00252___    551 CGCGAGGCGTTGATTTTACAAGCGGGCCTGTCAAAGAAAGAGTGAAGGCT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01470___yb    551 CGCGAGGCGTTGATTTTACAAGCGGGCCTGTCAAAGAAAGAGTGAAGGCT    600

BSNT_00252___    601 ATTGTCCCGCTTCTTGTCCCGCTCTTCGTCAGCGCATTTAAACGCGCCGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01470___yb    601 ATTGTCCCGCTTCTTGTCCCGCTCTTCGTCAGCGCATTTAAACGCGCCGA    650

BSNT_00252___    651 AGAGCTTGCGGTGGCAATGGAAGCAAGAGGCTATCAAGGCGGAGAAGGAC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01470___yb    651 AGAGCTTGCGGTGGCAATGGAAGCAAGAGGCTATCAAGGCGGAGAAGGAC    700

BSNT_00252___    701 GTACGAAATATAGAAAGCTTGTATGGACAGGAAAAGACACTTCTGTCATT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01470___yb    701 GTACGAAATATAGAAAGCTTGTATGGACAGGAAAAGACACTTCTGTCATT    750

BSNT_00252___    751 GTCAGCTTAATTGTATTAGCTGCTTTGTTATTTTTCTTAAGGGCTTAG    798
                     ||||||||||||||||||||||||||||||||||||||||||||||||
BSU01470___yb    751 GTCAGCTTAATTGTATTAGCTGCTTTGTTATTTTTCTTAAGGGCTTAG    798


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