Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00248 and BSU01430
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:16
# Commandline: needle
# -asequence dna-align/BSNT_00248___rpoA.1.22522.seq
# -bsequence dna-align/BSU01430___rpoA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00248___rpoA-BSU01430___rpoA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00248___rpoA-BSU01430___rpoA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00248___rpoA
# 2: BSU01430___rpoA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 945
# Identity: 945/945 (100.0%)
# Similarity: 945/945 (100.0%)
# Gaps: 0/945 ( 0.0%)
# Score: 4725.0
#
#
#=======================================
BSNT_00248___ 1 ATGATCGAGATTGAAAAACCAAAAATCGAAACGGTTGAAATCAGCGACGA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 1 ATGATCGAGATTGAAAAACCAAAAATCGAAACGGTTGAAATCAGCGACGA 50
BSNT_00248___ 51 TGCCAAATTTGGTAAGTTTGTCGTAGAGCCACTTGAGCGTGGATATGGTA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 51 TGCCAAATTTGGTAAGTTTGTCGTAGAGCCACTTGAGCGTGGATATGGTA 100
BSNT_00248___ 101 CAACTCTGGGTAACTCCTTACGTCGTATCCTCTTATCCTCACTCCCTGGT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 101 CAACTCTGGGTAACTCCTTACGTCGTATCCTCTTATCCTCACTCCCTGGT 150
BSNT_00248___ 151 GCCGCTGTAACATCAATCCAGATAGATGGTGTACTGCACGAATTCTCGAC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 151 GCCGCTGTAACATCAATCCAGATAGATGGTGTACTGCACGAATTCTCGAC 200
BSNT_00248___ 201 AATTGAAGGCGTTGTGGAAGATGTTACAACGATTATCTTACACATTAAAA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 201 AATTGAAGGCGTTGTGGAAGATGTTACAACGATTATCTTACACATTAAAA 250
BSNT_00248___ 251 AGCTTGCATTGAAAATCTACTCTGATGAAGAGAAGACGCTAGAAATTGAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 251 AGCTTGCATTGAAAATCTACTCTGATGAAGAGAAGACGCTAGAAATTGAT 300
BSNT_00248___ 301 GTACAGGGTGAAGGAACTGTAACGGCAGCTGATATTACACACGATAGTGA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 301 GTACAGGGTGAAGGAACTGTAACGGCAGCTGATATTACACACGATAGTGA 350
BSNT_00248___ 351 TGTAGAGATCTTAAATCCTGATCTTCATATCGCGACTCTTGGTGAGAATG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 351 TGTAGAGATCTTAAATCCTGATCTTCATATCGCGACTCTTGGTGAGAATG 400
BSNT_00248___ 401 CGAGTTTCCGAGTTCGCCTTACTGCTCAAAGAGGACGTGGGTATACGCCT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 401 CGAGTTTCCGAGTTCGCCTTACTGCTCAAAGAGGACGTGGGTATACGCCT 450
BSNT_00248___ 451 GCTGACGCAAACAAGAGAGACGATCAGCCAATCGGCGTGATTCCGATCGA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 451 GCTGACGCAAACAAGAGAGACGATCAGCCAATCGGCGTGATTCCGATCGA 500
BSNT_00248___ 501 TTCTATCTATACGCCAGTTTCTCGTGTATCTTATCAGGTAGAGAACACTC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 501 TTCTATCTATACGCCAGTTTCTCGTGTATCTTATCAGGTAGAGAACACTC 550
BSNT_00248___ 551 GTGTAGGCCAAGTTGCAAACTATGATAAACTTACACTTGATGTTTGGACT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 551 GTGTAGGCCAAGTTGCAAACTATGATAAACTTACACTTGATGTTTGGACT 600
BSNT_00248___ 601 GATGGAAGCACTGGACCGAAAGAAGCAATTGCGCTTGGTTCAAAGATTTT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 601 GATGGAAGCACTGGACCGAAAGAAGCAATTGCGCTTGGTTCAAAGATTTT 650
BSNT_00248___ 651 AACTGAACACCTTAATATATTCGTTGGTTTAACTGACGAAGCTCAACATG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 651 AACTGAACACCTTAATATATTCGTTGGTTTAACTGACGAAGCTCAACATG 700
BSNT_00248___ 701 CTGAAATCATGGTTGAAAAAGAAGAAGATCAAAAAGAGAAAGTTCTTGAA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 701 CTGAAATCATGGTTGAAAAAGAAGAAGATCAAAAAGAGAAAGTTCTTGAA 750
BSNT_00248___ 751 ATGACAATTGAAGAATTGGATCTTTCTGTTCGTTCTTACAACTGCTTAAA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 751 ATGACAATTGAAGAATTGGATCTTTCTGTTCGTTCTTACAACTGCTTAAA 800
BSNT_00248___ 801 GCGTGCGGGTATTAACACGGTTCAAGAGCTTGCGAACAAGACGGAAGAAG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 801 GCGTGCGGGTATTAACACGGTTCAAGAGCTTGCGAACAAGACGGAAGAAG 850
BSNT_00248___ 851 ATATGATGAAAGTTCGAAATCTAGGACGCAAATCACTTGAAGAAGTGAAA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 851 ATATGATGAAAGTTCGAAATCTAGGACGCAAATCACTTGAAGAAGTGAAA 900
BSNT_00248___ 901 GCGAAACTAGAAGAACTTGGACTCGGACTTCGCAAAGACGATTGA 945
|||||||||||||||||||||||||||||||||||||||||||||
BSU01430___rp 901 GCGAAACTAGAAGAACTTGGACTCGGACTTCGCAAAGACGATTGA 945
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