Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00240 and BSU01360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:15
# Commandline: needle
# -asequence dna-align/BSNT_00240___secY.1.22522.seq
# -bsequence dna-align/BSU01360___secY.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00240___secY-BSU01360___secY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00240___secY-BSU01360___secY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00240___secY
# 2: BSU01360___secY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1296
# Identity: 1292/1296 (99.7%)
# Similarity: 1292/1296 (99.7%)
# Gaps: 0/1296 ( 0.0%)
# Score: 6444.0
#
#
#=======================================
BSNT_00240___ 1 TTGTTTAAAACAATCTCCAACTTTATGCGTGTGAGTGATATCAGGAATAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 1 TTGTTTAAAACAATCTCCAACTTTATGCGTGTGAGTGATATCAGGAATAA 50
BSNT_00240___ 51 AATCATATTCACTTTACTCATGCTTATCGTCTTTCGCATAGGTGCGTTTA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 51 AATCATATTCACTTTACTCATGCTTATCGTCTTTCGCATAGGTGCGTTTA 100
BSNT_00240___ 101 TTCCTGTGCCTTACGTTAACGCTGAAGCGTTACAGGCGCAGTCTCAAATG 150
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU01360___se 101 TTCCTGTGCCTTACGTTAACGCTGAAGCGTTACAGGCACAGTCTCAAATG 150
BSNT_00240___ 151 GGTGTTTTTGATCTCCTTAATACATTTGGCGGCGGTGCGCTTTACCAATT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 151 GGTGTTTTTGATCTCCTTAATACATTTGGCGGCGGTGCGCTTTACCAATT 200
BSNT_00240___ 201 TTCCATTTTCGCAATGGGAATTACTCCTTATATCACGGCTTCGATCATCA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 201 TTCCATTTTCGCAATGGGAATTACTCCTTATATCACGGCTTCGATCATCA 250
BSNT_00240___ 251 TTCAGCTGCTTCAGATGGATGTTGTACCGAAGTTTACCGAGTGGTCTAAG 300
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU01360___se 251 TTCAGCTGCTTCAGATGGATGTGGTACCGAAGTTTACCGAGTGGTCTAAG 300
BSNT_00240___ 301 CAAGGTGAAGTTGGCCGCCGTAAATTAGCTCAGTTCACAAGGTACTTTAC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 301 CAAGGTGAAGTTGGCCGCCGTAAATTAGCTCAGTTCACAAGGTACTTTAC 350
BSNT_00240___ 351 GATTGTGCTTGGTTTCATCCAAGCGTTAGGTATGTCATATGGATTCAACA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 351 GATTGTGCTTGGTTTCATCCAAGCGTTAGGTATGTCATATGGATTCAACA 400
BSNT_00240___ 401 ATCTGGCAAACGGTATGCTGATCGAAAAATCCGGTGTATCGACATATCTT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 401 ATCTGGCAAACGGTATGCTGATCGAAAAATCCGGTGTATCGACATATCTT 450
BSNT_00240___ 451 ATCATTGCTTTAGTACTCACTGGCGGAACTGCCTTTTTAATGTGGCTTGG 500
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU01360___se 451 ATCATTGCTTTAGTGCTCACTGGCGGAACTGCCTTTTTAATGTGGCTTGG 500
BSNT_00240___ 501 GGAACAAATTACTTCTCATGGAGTAGGCAACGGAATATCGATCATTATCT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 501 GGAACAAATTACTTCTCATGGAGTAGGCAACGGAATATCGATCATTATCT 550
BSNT_00240___ 551 TCGCGGGGATTGTGTCTAGTATTCCAAAAACAATTGGGCAAATATATGAG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 551 TCGCGGGGATTGTGTCTAGTATTCCAAAAACAATTGGGCAAATATATGAG 600
BSNT_00240___ 601 ACTCAATTTGTCGGCAGCAACGATCAGTTGTTTATTCATATTGTGAAAGT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 601 ACTCAATTTGTCGGCAGCAACGATCAGTTGTTTATTCATATTGTGAAAGT 650
BSNT_00240___ 651 CGCACTTCTTGTGATTGCGATTTTAGCAGTTATTGTTGGAGTTATTTTCA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 651 CGCACTTCTTGTGATTGCGATTTTAGCAGTTATTGTTGGAGTTATTTTCA 700
BSNT_00240___ 701 TTCAGCAAGCCGTACGGAAAATTGCGATTCAATATGCTAAAGGCACAGGT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 701 TTCAGCAAGCCGTACGGAAAATTGCGATTCAATATGCTAAAGGCACAGGT 750
BSNT_00240___ 751 CGTTCACCTGCTGGCGGGGGTCAGTCTACACACCTTCCATTGAAAGTGAA 800
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU01360___se 751 CGTTCACCTGCTGGCGGAGGTCAGTCTACACACCTTCCATTGAAAGTGAA 800
BSNT_00240___ 801 TCCTGCAGGGGTTATTCCGGTAATCTTTGCGGTTGCGTTTTTGATAACGC 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 801 TCCTGCAGGGGTTATTCCGGTAATCTTTGCGGTTGCGTTTTTGATAACGC 850
BSNT_00240___ 851 CGCGGACGATCGCGTCATTCTTTGGAACAAACGATGTGACAAAGTGGATT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 851 CGCGGACGATCGCGTCATTCTTTGGAACAAACGATGTGACAAAGTGGATT 900
BSNT_00240___ 901 CAAAACAACTTTGATAATACGCATCCGGTGGGTATGGCGATATATGTTGC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 901 CAAAACAACTTTGATAATACGCATCCGGTGGGTATGGCGATATATGTTGC 950
BSNT_00240___ 951 GTTGATTATTGCCTTTACGTACTTTTATGCTTTTGTACAGGTAAACCCTG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 951 GTTGATTATTGCCTTTACGTACTTTTATGCTTTTGTACAGGTAAACCCTG 1000
BSNT_00240___ 1001 AACAAATGGCTGATAACCTTAAAAAACAGGGTGGCTATATCCCGGGGGTT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 1001 AACAAATGGCTGATAACCTTAAAAAACAGGGTGGCTATATCCCGGGGGTT 1050
BSNT_00240___ 1051 CGTCCAGGGAAAATGACTCAAGATAGAATTACGAGCATTTTGTATCGACT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 1051 CGTCCAGGGAAAATGACTCAAGATAGAATTACGAGCATTTTGTATCGACT 1100
BSNT_00240___ 1101 TACGTTTGTGGGTTCTATATTCTTAGCCGTGATTTCCATTCTTCCTATCT 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 1101 TACGTTTGTGGGTTCTATATTCTTAGCCGTGATTTCCATTCTTCCTATCT 1150
BSNT_00240___ 1151 TTTTCATTCAATTCGCTGGATTGCCTCAAAGTGCACAAATTGGCGGAACA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 1151 TTTTCATTCAATTCGCTGGATTGCCTCAAAGTGCACAAATTGGCGGAACA 1200
BSNT_00240___ 1201 TCTTTGTTAATTGTTGTCGGGGTAGCCTTGGAGACAATGAAACAACTAGA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 1201 TCTTTGTTAATTGTTGTCGGGGTAGCCTTGGAGACAATGAAACAACTAGA 1250
BSNT_00240___ 1251 AAGCCAGTTGGTGAAACGAAACTACCGTGGATTTATGAAAAACTAG 1296
||||||||||||||||||||||||||||||||||||||||||||||
BSU01360___se 1251 AAGCCAGTTGGTGAAACGAAACTACCGTGGATTTATGAAAAACTAG 1296
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