Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00239 and BSU01350

See Amino acid alignment / Visit BSNT_00239 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:15
# Commandline: needle
#    -asequence dna-align/BSNT_00239___rplO.1.22522.seq
#    -bsequence dna-align/BSU01350___rplO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00239___rplO-BSU01350___rplO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00239___rplO-BSU01350___rplO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00239___rplO
# 2: BSU01350___rplO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity:     440/441 (99.8%)
# Similarity:   440/441 (99.8%)
# Gaps:           0/441 ( 0.0%)
# Score: 2196.0
# 
#
#=======================================

BSNT_00239___      1 ATGAAACTTCATGAATTAAAACCTTCAGAAGGTTCACGCAAAACGCGTAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01350___rp      1 ATGAAACTTCATGAATTAAAACCTTCAGAAGGTTCACGCAAAACGCGTAA     50

BSNT_00239___     51 TCGCGTAGGTCGTGGTATTGGTTCTGGCAACGGTAAAACAGCTGGTAAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01350___rp     51 TCGCGTAGGTCGTGGTATTGGTTCTGGCAACGGTAAAACAGCTGGTAAAG    100

BSNT_00239___    101 GTCACAAAGGTCAAAACGCTCGTTCTGGCGGCGGTGTACGCCCTGGATTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01350___rp    101 GTCACAAAGGTCAAAACGCTCGTTCTGGCGGCGGTGTACGCCCTGGATTC    150

BSNT_00239___    151 GAGGGGGGACAAATGCCTTTATTCCAACGTCTTCCTAAACGCGGTTTCAC    200
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU01350___rp    151 GAGGGGGGACAAATGCCTTTATTCCAACGTCTTCCTAAACGTGGTTTCAC    200

BSNT_00239___    201 TAACATCAACCGCAAGGAATACGCTGTAGTCAACCTAGACAAATTGAACG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01350___rp    201 TAACATCAACCGCAAGGAATACGCTGTAGTCAACCTAGACAAATTGAACG    250

BSNT_00239___    251 GTTTTGCAGAAGGAACGGAAGTCACTCCTGAACTTCTTCTAGAGACTGGT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01350___rp    251 GTTTTGCAGAAGGAACGGAAGTCACTCCTGAACTTCTTCTAGAGACTGGT    300

BSNT_00239___    301 GTTATTAGCAAACTTAATGCAGGAGTAAAGATTCTTGGCAACGGTAAATT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01350___rp    301 GTTATTAGCAAACTTAATGCAGGAGTAAAGATTCTTGGCAACGGTAAATT    350

BSNT_00239___    351 AGAGAAAAAATTAACTGTAAAAGCCAATAAATTCTCTGCTTCTGCGAAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01350___rp    351 AGAGAAAAAATTAACTGTAAAAGCCAATAAATTCTCTGCTTCTGCGAAAG    400

BSNT_00239___    401 AAGCTGTTGAAGCTGCTGGCGGTACAGCTGAGGTGATCTAA    441
                     |||||||||||||||||||||||||||||||||||||||||
BSU01350___rp    401 AAGCTGTTGAAGCTGCTGGCGGTACAGCTGAGGTGATCTAA    441


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