Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00236 and BSU01320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:15
# Commandline: needle
# -asequence dna-align/BSNT_00236___rplR.1.22522.seq
# -bsequence dna-align/BSU01320___rplR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00236___rplR-BSU01320___rplR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00236___rplR-BSU01320___rplR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00236___rplR
# 2: BSU01320___rplR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 363/363 (100.0%)
# Similarity: 363/363 (100.0%)
# Gaps: 0/363 ( 0.0%)
# Score: 1815.0
#
#
#=======================================
BSNT_00236___ 1 ATGATTACGAAAACTAGCAAAAATGCTGCTCGTCTTAAAAGACACGCTCG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01320___rp 1 ATGATTACGAAAACTAGCAAAAATGCTGCTCGTCTTAAAAGACACGCTCG 50
BSNT_00236___ 51 TGTTCGCGCTAAACTTTCCGGTACTGCTGAAAGACCGCGCCTGAACGTTT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01320___rp 51 TGTTCGCGCTAAACTTTCCGGTACTGCTGAAAGACCGCGCCTGAACGTTT 100
BSNT_00236___ 101 TCCGTTCTAACAAGCACATTTACGCTCAAATCATCGATGATGTAAATGGT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01320___rp 101 TCCGTTCTAACAAGCACATTTACGCTCAAATCATCGATGATGTAAATGGT 150
BSNT_00236___ 151 GTAACACTTGCTAGTGCATCTACTCTCGATAAAGACTTGAACGTTGAAAG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01320___rp 151 GTAACACTTGCTAGTGCATCTACTCTCGATAAAGACTTGAACGTTGAAAG 200
BSNT_00236___ 201 CACTGGAGATACTTCTGCTGCTACTAAAGTTGGAGAATTAGTTGCAAAAC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01320___rp 201 CACTGGAGATACTTCTGCTGCTACTAAAGTTGGAGAATTAGTTGCAAAAC 250
BSNT_00236___ 251 GCGCTGCTGAAAAAGGCATTTCTGACGTAGTATTTGACCGTGGCGGATAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01320___rp 251 GCGCTGCTGAAAAAGGCATTTCTGACGTAGTATTTGACCGTGGCGGATAC 300
BSNT_00236___ 301 TTATACCATGGACGTGTAAAAGCTTTGGCTGATGCCGCTCGTGAAGCTGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01320___rp 301 TTATACCATGGACGTGTAAAAGCTTTGGCTGATGCCGCTCGTGAAGCTGG 350
BSNT_00236___ 351 ACTTAAATTTTAA 363
|||||||||||||
BSU01320___rp 351 ACTTAAATTTTAA 363
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