Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00235 and BSU01310

See Amino acid alignment / Visit BSNT_00235 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:14
# Commandline: needle
#    -asequence dna-align/BSNT_00235___rplF.1.22522.seq
#    -bsequence dna-align/BSU01310___rplF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00235___rplF-BSU01310___rplF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00235___rplF-BSU01310___rplF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00235___rplF
# 2: BSU01310___rplF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 540
# Identity:     540/540 (100.0%)
# Similarity:   540/540 (100.0%)
# Gaps:           0/540 ( 0.0%)
# Score: 2700.0
# 
#
#=======================================

BSNT_00235___      1 ATGTCTCGTGTAGGTAAGAAGCTACTTGAGATTCCTTCTGATGTTACAGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01310___rp      1 ATGTCTCGTGTAGGTAAGAAGCTACTTGAGATTCCTTCTGATGTTACAGT     50

BSNT_00235___     51 AACGTTAAATGATAACAACACTGTAGCTGTGAAAGGACCAAAAGGAGAAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01310___rp     51 AACGTTAAATGATAACAACACTGTAGCTGTGAAAGGACCAAAAGGAGAAT    100

BSNT_00235___    101 TAACTCGTACGTTTCACCCTGATATGGAGATTAAAGTAGAGGACAATGTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01310___rp    101 TAACTCGTACGTTTCACCCTGATATGGAGATTAAAGTAGAGGACAATGTG    150

BSNT_00235___    151 CTTACAGTCGCTCGTCCTTCTGATCAAAAAGAGCACCGTGCCCTGCATGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01310___rp    151 CTTACAGTCGCTCGTCCTTCTGATCAAAAAGAGCACCGTGCCCTGCATGG    200

BSNT_00235___    201 TACGACTCGCAGTCTGCTTGGCAACATGGTTGAAGGTGTATCTAAAGGAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01310___rp    201 TACGACTCGCAGTCTGCTTGGCAACATGGTTGAAGGTGTATCTAAAGGAT    250

BSNT_00235___    251 TTGAAAGAGGTTTGGAATTAGTCGGTGTCGGTTACCGTGCTTCTAAATCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01310___rp    251 TTGAAAGAGGTTTGGAATTAGTCGGTGTCGGTTACCGTGCTTCTAAATCC    300

BSNT_00235___    301 GGAAATAAACTTGTTTTAAACGTTGGATACTCTCATCCTGTTGAGATCGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01310___rp    301 GGAAATAAACTTGTTTTAAACGTTGGATACTCTCATCCTGTTGAGATCGT    350

BSNT_00235___    351 TCCTGAAGAAGGCATCGAAATCGAAGTTCCTTCTCAAACAAAAGTAGTTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01310___rp    351 TCCTGAAGAAGGCATCGAAATCGAAGTTCCTTCTCAAACAAAAGTAGTTG    400

BSNT_00235___    401 TAAAAGGTACAGACAAAGAACGCGTAGGAGCTATTGCTGCTAACATCCGC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01310___rp    401 TAAAAGGTACAGACAAAGAACGCGTAGGAGCTATTGCTGCTAACATCCGC    450

BSNT_00235___    451 GCTGTACGTTCTCCAGAGCCTTACAAAGGTAAAGGAATCCGCTACGAAGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01310___rp    451 GCTGTACGTTCTCCAGAGCCTTACAAAGGTAAAGGAATCCGCTACGAAGG    500

BSNT_00235___    501 TGAAGTTGTTCGCCGTAAAGAAGGTAAATCTGCTAAGTAA    540
                     ||||||||||||||||||||||||||||||||||||||||
BSU01310___rp    501 TGAAGTTGTTCGCCGTAAAGAAGGTAAATCTGCTAAGTAA    540


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