Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00232 and BSU01280

See Amino acid alignment / Visit BSNT_00232 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:14
# Commandline: needle
#    -asequence dna-align/BSNT_00232___rplE.1.22522.seq
#    -bsequence dna-align/BSU01280___rplE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00232___rplE-BSU01280___rplE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00232___rplE-BSU01280___rplE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00232___rplE
# 2: BSU01280___rplE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 540
# Identity:     539/540 (99.8%)
# Similarity:   539/540 (99.8%)
# Gaps:           0/540 ( 0.0%)
# Score: 2691.0
# 
#
#=======================================

BSNT_00232___      1 ATGAACCGCCTTAAAGAAAAGTACAATAAAGAAATTGCACCTGCTTTAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01280___rp      1 ATGAACCGCCTTAAAGAAAAGTACAATAAAGAAATTGCACCTGCTTTAAT     50

BSNT_00232___     51 GACTAAGTTCAACTATGATTCAGTCATGCAAGTGCCTAAAATCGAAAAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01280___rp     51 GACTAAGTTCAACTATGATTCAGTCATGCAAGTGCCTAAAATCGAAAAAA    100

BSNT_00232___    101 TCGTAATCAACATGGGTGTTGGTGACGCTGTTCAAAACGCCAAAGCAATC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01280___rp    101 TCGTAATCAACATGGGTGTTGGTGACGCTGTTCAAAACGCCAAAGCAATC    150

BSNT_00232___    151 GACAGTGCTGTTGAAGAATTAACGTTTATCGCAGGTCAAAAACCTGTCGT    200
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU01280___rp    151 GACAGTGCTGTTGAGGAATTAACGTTTATCGCAGGTCAAAAACCTGTCGT    200

BSNT_00232___    201 TACTCGTGCGAAGAAATCAATTGCTGGATTCCGTCTTCGTGAGGGAATGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01280___rp    201 TACTCGTGCGAAGAAATCAATTGCTGGATTCCGTCTTCGTGAGGGAATGC    250

BSNT_00232___    251 CTATCGGTGCGAAAGTAACTCTTCGCGGAGAGCGCATGTATGATTTCCTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01280___rp    251 CTATCGGTGCGAAAGTAACTCTTCGCGGAGAGCGCATGTATGATTTCCTT    300

BSNT_00232___    301 GATAAACTTATTTCTGTATCTTTACCGCGTGTACGTGACTTCCGCGGGGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01280___rp    301 GATAAACTTATTTCTGTATCTTTACCGCGTGTACGTGACTTCCGCGGGGT    350

BSNT_00232___    351 TTCTAAAAAATCTTTCGACGGTCGCGGTAACTACACACTTGGTATCAAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01280___rp    351 TTCTAAAAAATCTTTCGACGGTCGCGGTAACTACACACTTGGTATCAAAG    400

BSNT_00232___    401 AACAGTTAATCTTCCCTGAAATTGACTACGATAAAGTAACAAAGGTTCGC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01280___rp    401 AACAGTTAATCTTCCCTGAAATTGACTACGATAAAGTAACAAAGGTTCGC    450

BSNT_00232___    451 GGAATGGACATCGTTATCGTAACAACTGCTAATACTGACGAAGAAGCTCG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01280___rp    451 GGAATGGACATCGTTATCGTAACAACTGCTAATACTGACGAAGAAGCTCG    500

BSNT_00232___    501 TGAGCTATTAACTCAAGTAGGTATGCCGTTCCAGAAATAA    540
                     ||||||||||||||||||||||||||||||||||||||||
BSU01280___rp    501 TGAGCTATTAACTCAAGTAGGTATGCCGTTCCAGAAATAA    540


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