Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00230 and BSU01260

See Amino acid alignment / Visit BSNT_00230 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:14
# Commandline: needle
#    -asequence dna-align/BSNT_00230___rplN.1.22522.seq
#    -bsequence dna-align/BSU01260___rplN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00230___rplN-BSU01260___rplN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00230___rplN-BSU01260___rplN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00230___rplN
# 2: BSU01260___rplN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 369
# Identity:     369/369 (100.0%)
# Similarity:   369/369 (100.0%)
# Gaps:           0/369 ( 0.0%)
# Score: 1845.0
# 
#
#=======================================

BSNT_00230___      1 ATGATTCAACAAGAGACTCGTTTAAAAGTAGCTGACAACTCTGGCGCACG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01260___rp      1 ATGATTCAACAAGAGACTCGTTTAAAAGTAGCTGACAACTCTGGCGCACG     50

BSNT_00230___     51 TGAAGTACTTACTATTAAAGTTCTTGGTGGTTCTGGACGTAAAACAGCTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01260___rp     51 TGAAGTACTTACTATTAAAGTTCTTGGTGGTTCTGGACGTAAAACAGCTA    100

BSNT_00230___    101 ACATTGGTGATGTAATTGTTTGCACGGTTAAACAAGCAACACCAGGAGGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01260___rp    101 ACATTGGTGATGTAATTGTTTGCACGGTTAAACAAGCAACACCAGGAGGC    150

BSNT_00230___    151 GTTGTCAAAAAAGGTGAAGTCGTAAAAGCTGTTATCGTTCGCACTAAAAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01260___rp    151 GTTGTCAAAAAAGGTGAAGTCGTAAAAGCTGTTATCGTTCGCACTAAAAG    200

BSNT_00230___    201 CGGAGCGCGCAGAAGTGACGGTTCATACATCAGCTTCGATGAGAATGCAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01260___rp    201 CGGAGCGCGCAGAAGTGACGGTTCATACATCAGCTTCGATGAGAATGCAT    250

BSNT_00230___    251 GTGTTATCATCCGTGACGACAAGAGCCCACGCGGAACTCGTATCTTCGGA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01260___rp    251 GTGTTATCATCCGTGACGACAAGAGCCCACGCGGAACTCGTATCTTCGGA    300

BSNT_00230___    301 CCAGTTGCTCGTGAATTGCGTGAAAACAACTTTATGAAAATTGTTTCTCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01260___rp    301 CCAGTTGCTCGTGAATTGCGTGAAAACAACTTTATGAAAATTGTTTCTCT    350

BSNT_00230___    351 AGCTCCAGAAGTTATCTAA    369
                     |||||||||||||||||||
BSU01260___rp    351 AGCTCCAGAAGTTATCTAA    369


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