Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00227 and BSU01230

See Amino acid alignment / Visit BSNT_00227 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:14
# Commandline: needle
#    -asequence dna-align/BSNT_00227___rplP.1.22522.seq
#    -bsequence dna-align/BSU01230___rplP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00227___rplP-BSU01230___rplP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00227___rplP-BSU01230___rplP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00227___rplP
# 2: BSU01230___rplP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 435
# Identity:     433/435 (99.5%)
# Similarity:   433/435 (99.5%)
# Gaps:           0/435 ( 0.0%)
# Score: 2157.0
# 
#
#=======================================

BSNT_00227___      1 ATGTTATTACCAAAACGCGTTAAATATCGCAGAGAGCATCGCGGAAAAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01230___rp      1 ATGTTATTACCAAAACGCGTTAAATATCGCAGAGAGCATCGCGGAAAAAT     50

BSNT_00227___     51 GCGTGGCCGTGCGAAAGGCGGTACTGAAGTACATTTTGGAGAATTCGGTA    100
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU01230___rp     51 GCGTGGCCGTGCGAAAGGCGGTACTGAAGTACATTTCGGAGAATTCGGTA    100

BSNT_00227___    101 TCCAAGCTCTTGAAGCTTCTTGGATTACTAACCGTCAAATCGAAGCTGCA    150
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU01230___rp    101 TCCAAGCTCTAGAAGCTTCTTGGATTACTAACCGTCAAATCGAAGCTGCA    150

BSNT_00227___    151 CGTATTGCGATGACTCGTTACATGAAACGTGGCGGTAAAGTTTGGATCAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01230___rp    151 CGTATTGCGATGACTCGTTACATGAAACGTGGCGGTAAAGTTTGGATCAA    200

BSNT_00227___    201 AATTTTCCCTTCTAAACCTTACACTGCTAAACCACTTGAGGTACGTATGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01230___rp    201 AATTTTCCCTTCTAAACCTTACACTGCTAAACCACTTGAGGTACGTATGG    250

BSNT_00227___    251 GATCCGGTAAAGGGGCTCCAGAAGGTTGGGTAGCTGTTGTAAAACCGGGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01230___rp    251 GATCCGGTAAAGGGGCTCCAGAAGGTTGGGTAGCTGTTGTAAAACCGGGC    300

BSNT_00227___    301 AAAGTTTTATTTGAAATTTCTGGTGTGTCTGAAGAGGTTGCTCGTGAAGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01230___rp    301 AAAGTTTTATTTGAAATTTCTGGTGTGTCTGAAGAGGTTGCTCGTGAAGC    350

BSNT_00227___    351 GCTTCGCCTTGCATCTCACAAATTGCCAATTAAAACGAAGTTCGTAAAAC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01230___rp    351 GCTTCGCCTTGCATCTCACAAATTGCCAATTAAAACGAAGTTCGTAAAAC    400

BSNT_00227___    401 GTGAAGAAATTGGTGGTGAATCAAATGAAAGCTAA    435
                     |||||||||||||||||||||||||||||||||||
BSU01230___rp    401 GTGAAGAAATTGGTGGTGAATCAAATGAAAGCTAA    435


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