Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00226 and BSU01220
See
Amino acid alignment /
Visit
BSNT_00226 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:14
# Commandline: needle
# -asequence dna-align/BSNT_00226___rpsC.1.22522.seq
# -bsequence dna-align/BSU01220___rpsC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00226___rpsC-BSU01220___rpsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00226___rpsC-BSU01220___rpsC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00226___rpsC
# 2: BSU01220___rpsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 657
# Identity: 655/657 (99.7%)
# Similarity: 655/657 (99.7%)
# Gaps: 0/657 ( 0.0%)
# Score: 3267.0
#
#
#=======================================
BSNT_00226___ 1 GTGGGTCAAAAGGTAAATCCAGTCGGTCTTCGTATCGGAGTCATTCGTGA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01220___rp 1 GTGGGTCAAAAGGTAAATCCAGTCGGTCTTCGTATCGGAGTCATTCGTGA 50
BSNT_00226___ 51 TTGGGAATCTAAGTGGTACGCTGGTAAAGATTACGCTGACTTCCTGCACG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01220___rp 51 TTGGGAATCTAAGTGGTACGCTGGTAAAGATTACGCTGACTTCCTGCACG 100
BSNT_00226___ 101 AAGATTTAAAAATTCGTGAATACATTAGCAAACGCCTTTCTGACGCTTCT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01220___rp 101 AAGATTTAAAAATTCGTGAATACATTAGCAAACGCCTTTCTGACGCTTCT 150
BSNT_00226___ 151 GTTTCTAAAGTAGAAATCGAGCGTGCAGCAAACCGCGTTAACATTACGAT 200
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU01220___rp 151 GTTTCTAAAGTAGAAATTGAGCGTGCAGCAAACCGCGTTAACATTACGAT 200
BSNT_00226___ 201 CCACACAGCTAAGCCTGGTATGGTTATCGGTAAAGGCGGTTCTGAAGTCG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01220___rp 201 CCACACAGCTAAGCCTGGTATGGTTATCGGTAAAGGCGGTTCTGAAGTCG 250
BSNT_00226___ 251 AAGCACTTCGCAAAGCCCTTAACAGCCTTACTGGCAAGCGTGTACACATT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01220___rp 251 AAGCACTTCGCAAAGCCCTTAACAGCCTTACTGGCAAGCGTGTACACATT 300
BSNT_00226___ 301 AACATTCTTGAAATCAAAAGAGCAGATCTTGATGCACAGCTAGTTGCTGA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01220___rp 301 AACATTCTTGAAATCAAAAGAGCAGATCTTGATGCACAGCTAGTTGCTGA 350
BSNT_00226___ 351 CAACATCGCTCGTCAATTAGAAAACCGTGTTTCTTTCCGCCGTGCGCAGA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01220___rp 351 CAACATCGCTCGTCAATTAGAAAACCGTGTTTCTTTCCGCCGTGCGCAGA 400
BSNT_00226___ 401 AACAACAAATCCAACGTACTATGCGTGCTGGAGCACAAGGTGTGAAAACA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01220___rp 401 AACAACAAATCCAACGTACTATGCGTGCTGGAGCACAAGGTGTGAAAACA 450
BSNT_00226___ 451 ATGGTTTCTGGTCGTCTTGGCGGTGCAGATATCGCTCGTTCTGAATACTA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01220___rp 451 ATGGTTTCTGGTCGTCTTGGCGGTGCAGATATCGCTCGTTCTGAATACTA 500
BSNT_00226___ 501 CAGTGAAGGAACTGTTCCATTGCACACATTACGTGCGGACATTGACTATG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01220___rp 501 CAGTGAAGGAACTGTTCCATTGCACACATTACGTGCGGACATTGACTATG 550
BSNT_00226___ 551 CAACATCTGAAGCTGATACTACTTACGGTAAGCTTGGTGTAAAAGTCTGG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01220___rp 551 CAACATCTGAAGCTGATACTACTTACGGTAAGCTTGGTGTAAAAGTCTGG 600
BSNT_00226___ 601 ATCTATCGTGGAGAGGTTCTTCCTACTAAGAAGAAAAAAGAGGAAGGAGG 650
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU01220___rp 601 ATCTATCGTGGAGAGGTTCTTCCTACTAAGAAGAAAAATGAGGAAGGAGG 650
BSNT_00226___ 651 AAAATAA 657
|||||||
BSU01220___rp 651 AAAATAA 657
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.