Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_00225 and BSU01210

See Amino acid alignment / Visit BSNT_00225 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:13
# Commandline: needle
#    -asequence dna-align/BSNT_00225___rplV.1.22522.seq
#    -bsequence dna-align/BSU01210___rplV.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00225___rplV-BSU01210___rplV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00225___rplV-BSU01210___rplV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00225___rplV
# 2: BSU01210___rplV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 342
# Identity:     342/342 (100.0%)
# Similarity:   342/342 (100.0%)
# Gaps:           0/342 ( 0.0%)
# Score: 1710.0
# 
#
#=======================================

BSNT_00225___      1 ATGCAAGCTAAAGCTGTTGCAAGAACAGTCCGTATTGCTCCTCGTAAAGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01210___rp      1 ATGCAAGCTAAAGCTGTTGCAAGAACAGTCCGTATTGCTCCTCGTAAAGC     50

BSNT_00225___     51 ACGTCTAGTAATGGACCTGATTCGAGGCAAGCAAGTAGGTGAGGCAGTAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01210___rp     51 ACGTCTAGTAATGGACCTGATTCGAGGCAAGCAAGTAGGTGAGGCAGTAT    100

BSNT_00225___    101 CAATCTTGAACCTTACACCAAGAGCTGCTTCTCCAATTATCGAGAAAGTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01210___rp    101 CAATCTTGAACCTTACACCAAGAGCTGCTTCTCCAATTATCGAGAAAGTA    150

BSNT_00225___    151 TTAAAATCCGCTATTGCAAATGCTGAGCATAACTATGAAATGGACGCTAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01210___rp    151 TTAAAATCCGCTATTGCAAATGCTGAGCATAACTATGAAATGGACGCTAA    200

BSNT_00225___    201 CAACCTGGTTATTTCTCAAGCATTCGTTGACGAAGGCCCTACGTTAAAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01210___rp    201 CAACCTGGTTATTTCTCAAGCATTCGTTGACGAAGGCCCTACGTTAAAAA    250

BSNT_00225___    251 GATTCCGCCCACGTGCTATGGGACGTGCGAGCCAAATCAACAAACGTACG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01210___rp    251 GATTCCGCCCACGTGCTATGGGACGTGCGAGCCAAATCAACAAACGTACG    300

BSNT_00225___    301 AGCCACATTACAATCGTTGTATCAGAAAAGAAGGAGGGATAA    342
                     ||||||||||||||||||||||||||||||||||||||||||
BSU01210___rp    301 AGCCACATTACAATCGTTGTATCAGAAAAGAAGGAGGGATAA    342


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.