Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00224 and BSU01190

See Amino acid alignment / Visit BSNT_00224 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:13
# Commandline: needle
#    -asequence dna-align/BSNT_00224___rplB.1.22522.seq
#    -bsequence dna-align/BSU01190___rplB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00224___rplB-BSU01190___rplB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00224___rplB-BSU01190___rplB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00224___rplB
# 2: BSU01190___rplB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 834
# Identity:     834/834 (100.0%)
# Similarity:   834/834 (100.0%)
# Gaps:           0/834 ( 0.0%)
# Score: 4170.0
# 
#
#=======================================

BSNT_00224___      1 ATGGCGATTAAAAAGTATAAACCGACCTCTAATGGACGTCGTGGCATGAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp      1 ATGGCGATTAAAAAGTATAAACCGACCTCTAATGGACGTCGTGGCATGAC     50

BSNT_00224___     51 AACTTCAGATTTTGCTGAAATCACGACTGACAAGCCGGAAAAATCCTTGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp     51 AACTTCAGATTTTGCTGAAATCACGACTGACAAGCCGGAAAAATCCTTGC    100

BSNT_00224___    101 TTGCTCCCCTTCACAAAAAAGGCGGACGTAACAACCAAGGTAAATTGACT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp    101 TTGCTCCCCTTCACAAAAAAGGCGGACGTAACAACCAAGGTAAATTGACT    150

BSNT_00224___    151 GTACGTCACCAAGGTGGCGGACATAAACGCCAATACCGTGTTATCGACTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp    151 GTACGTCACCAAGGTGGCGGACATAAACGCCAATACCGTGTTATCGACTT    200

BSNT_00224___    201 CAAACGCGATAAAGATGGTATACCTGGACGCGTTGCTACAGTTGAATACG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp    201 CAAACGCGATAAAGATGGTATACCTGGACGCGTTGCTACAGTTGAATACG    250

BSNT_00224___    251 ATCCAAACCGTTCAGCTAACATCGCTCTAATCAACTATGCAGACGGAGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp    251 ATCCAAACCGTTCAGCTAACATCGCTCTAATCAACTATGCAGACGGAGAA    300

BSNT_00224___    301 AAACGTTACATTCTTGCTCCTAAAGGAATTCAAGTAGGTACTGAAATCAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp    301 AAACGTTACATTCTTGCTCCTAAAGGAATTCAAGTAGGTACTGAAATCAT    350

BSNT_00224___    351 GTCAGGTCCTGAAGCTGACATTAAAGTAGGTAATGCACTTCCACTTATCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp    351 GTCAGGTCCTGAAGCTGACATTAAAGTAGGTAATGCACTTCCACTTATCA    400

BSNT_00224___    401 ACATCCCTGTTGGTACAGTTGTGCATAACATTGAATTAAAACCTGGTAAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp    401 ACATCCCTGTTGGTACAGTTGTGCATAACATTGAATTAAAACCTGGTAAA    450

BSNT_00224___    451 GGCGGACAGCTTGTACGTTCAGCTGGTACATCTGCTCAGGTTCTTGGTAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp    451 GGCGGACAGCTTGTACGTTCAGCTGGTACATCTGCTCAGGTTCTTGGTAA    500

BSNT_00224___    501 AGAAGGTAAATACGTTCTTGTACGTCTTAACTCTGGTGAAGTTCGCATGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp    501 AGAAGGTAAATACGTTCTTGTACGTCTTAACTCTGGTGAAGTTCGCATGA    550

BSNT_00224___    551 TCCTTTCTGCTTGCCGTGCTTCTATCGGTCAAGTAGGTAACGAACAGCAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp    551 TCCTTTCTGCTTGCCGTGCTTCTATCGGTCAAGTAGGTAACGAACAGCAC    600

BSNT_00224___    601 GAACTTATCAACATTGGTAAAGCTGGACGTTCTCGCTGGAAAGGCATCCG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp    601 GAACTTATCAACATTGGTAAAGCTGGACGTTCTCGCTGGAAAGGCATCCG    650

BSNT_00224___    651 TCCTACAGTTCGTGGTTCTGTAATGAACCCTAACGATCACCCACACGGTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp    651 TCCTACAGTTCGTGGTTCTGTAATGAACCCTAACGATCACCCACACGGTG    700

BSNT_00224___    701 GTGGTGAAGGACGTGCGCCAATCGGACGTAAATCACCAATGTCTCCATGG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp    701 GTGGTGAAGGACGTGCGCCAATCGGACGTAAATCACCAATGTCTCCATGG    750

BSNT_00224___    751 GGCAAACCAACTCTTGGATTCAAGACTCGTAAGAAAAAGAACAAATCCGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01190___rp    751 GGCAAACCAACTCTTGGATTCAAGACTCGTAAGAAAAAGAACAAATCCGA    800

BSNT_00224___    801 TAAATTTATCGTACGTCGTCGTAAAAATAAATAA    834
                     ||||||||||||||||||||||||||||||||||
BSU01190___rp    801 TAAATTTATCGTACGTCGTCGTAAAAATAAATAA    834


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