Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00222 and BSU01180

See Amino acid alignment / Visit BSNT_00222 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:13
# Commandline: needle
#    -asequence dna-align/BSNT_00222___rplW.1.22522.seq
#    -bsequence dna-align/BSU01180___rplW.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00222___rplW-BSU01180___rplW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00222___rplW-BSU01180___rplW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00222___rplW
# 2: BSU01180___rplW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     285/288 (99.0%)
# Similarity:   285/288 (99.0%)
# Gaps:           0/288 ( 0.0%)
# Score: 1413.0
# 
#
#=======================================

BSNT_00222___      1 ATGAAAGATCCTCGTGATGTTCTAAAGCGCCCCGTCATTACTGAACGTTC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01180___rp      1 ATGAAAGATCCTCGTGATGTTCTAAAGCGCCCCGTCATTACTGAACGTTC     50

BSNT_00222___     51 TGCTGATTTAATGACTGAAAAGAAATATACTTTTGAAGTTGATGTAAGAG    100
                     |||.|||||||||||||||||.||||||||||||||||||||||||||||
BSU01180___rp     51 TGCCGATTTAATGACTGAAAAAAAATATACTTTTGAAGTTGATGTAAGAG    100

BSNT_00222___    101 CTAACAAAACAGAAGTGAAAGACGCGGTTGAAAGCATCTTTGGAGTGAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01180___rp    101 CTAACAAAACAGAAGTGAAAGACGCGGTTGAAAGCATCTTTGGAGTGAAA    150

BSNT_00222___    151 GTTGACAAAGTCAACATCATGAACTACAAAGGTAAATCAAAACGTGTTGG    200
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU01180___rp    151 GTTGACAAAGTCAACATCATGAACTACAAAGGCAAATCAAAACGTGTTGG    200

BSNT_00222___    201 ACGCTACACTGGTATGACTAGCCGTCGCAGAAAAGCGATCGTAAAACTTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01180___rp    201 ACGCTACACTGGTATGACTAGCCGTCGCAGAAAAGCGATCGTAAAACTTA    250

BSNT_00222___    251 CTGCAGACAGCAAAGAAATCGAAATTTTTGAAGCTTAA    288
                     ||||||||||||||||||||||||||||||||||||||
BSU01180___rp    251 CTGCAGACAGCAAAGAAATCGAAATTTTTGAAGCTTAA    288


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