Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00221 and BSU01170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:13
# Commandline: needle
# -asequence dna-align/BSNT_00221___rplD.1.22522.seq
# -bsequence dna-align/BSU01170___rplD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00221___rplD-BSU01170___rplD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00221___rplD-BSU01170___rplD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00221___rplD
# 2: BSU01170___rplD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 624
# Identity: 621/624 (99.5%)
# Similarity: 621/624 (99.5%)
# Gaps: 0/624 ( 0.0%)
# Score: 3093.0
#
#
#=======================================
BSNT_00221___ 1 ATGCCAAAAGTAGCATTATACAACCAAAACGGTTCTACTGCTGGTGACAT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp 1 ATGCCAAAAGTAGCATTATACAACCAAAACGGTTCTACTGCTGGTGACAT 50
BSNT_00221___ 51 CGAATTAAACGCTTCTGTATTTGGTATCGAACCAAATGAGAGTGTTGTAT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp 51 CGAATTAAACGCTTCTGTATTTGGTATCGAACCAAATGAGAGTGTTGTAT 100
BSNT_00221___ 101 TCGACGCTATTCTTATGCAAAGAGCTTCCTTACGTCAAGGAACTCACAAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp 101 TCGACGCTATTCTTATGCAAAGAGCTTCCTTACGTCAAGGAACTCACAAA 150
BSNT_00221___ 151 GTAAAAAATCGTTCTGAAGTACGCGGCGGAGGTCGTAAACCATGGCGTCA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp 151 GTAAAAAATCGTTCTGAAGTACGCGGCGGAGGTCGTAAACCATGGCGTCA 200
BSNT_00221___ 201 AAAAGGTACTGGACGTGCCCGTCAAGGTTCAATCCGTTCACCGCAATGGC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp 201 AAAAGGTACTGGACGTGCCCGTCAAGGTTCAATCCGTTCACCGCAATGGC 250
BSNT_00221___ 251 GCGGAGGTGGTGTCGTATTCGGCCCAACACCACGCAGCTATTCTTATAAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp 251 GCGGAGGTGGTGTCGTATTCGGCCCAACACCACGCAGCTATTCTTATAAA 300
BSNT_00221___ 301 TTACCTAAAAAAGTTCGCCGCTTGGCAATCAAATCAGTATTGTCTTCTAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp 301 TTACCTAAAAAAGTTCGCCGCTTGGCAATCAAATCAGTATTGTCTTCTAA 350
BSNT_00221___ 351 AGTGATCGACAACAATATCATCGTTCTTGAAGATCTTACTCTTGATACGG 400
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU01170___rp 351 AGTGATCGACAACAACATCATCGTTCTTGAAGATCTTACTCTTGATACGG 400
BSNT_00221___ 401 CTAAAACAAAAGAAATGGCAGCTATCCTTAAAGGGTTATCTGTTGAGAAA 450
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU01170___rp 401 CTAAAACAAAAGAAATGGCAGCTATCCTTAAAGGATTATCTGTTGAGAAA 450
BSNT_00221___ 451 AAAGCTTTAATCGTAACTGCGGATGCAAACGAAGCAGTAGCATTATCTGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp 451 AAAGCTTTAATCGTAACTGCGGATGCAAACGAAGCAGTAGCATTATCTGC 500
BSNT_00221___ 501 TCGTAACATTCCTGGAGTTACTGTTGTTGAAGCTAATGGAATCAACGTTT 550
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU01170___rp 501 TCGTAACATTCCTGGAGTTACTGTTGTTGAAGCTAACGGAATCAACGTTT 550
BSNT_00221___ 551 TAGACGTTGTCAACCACGAGAAGCTTCTGATTACAAAAGCAGCGGTTGAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp 551 TAGACGTTGTCAACCACGAGAAGCTTCTGATTACAAAAGCAGCGGTTGAA 600
BSNT_00221___ 601 AAAGTAGAGGAGGTGCTTGCATAA 624
||||||||||||||||||||||||
BSU01170___rp 601 AAAGTAGAGGAGGTGCTTGCATAA 624
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