Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_00207 and BSU01060

See Amino acid alignment / Visit BSNT_00207 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:08
# Commandline: needle
#    -asequence dna-align/BSNT_00207___ybxB.1.22522.seq
#    -bsequence dna-align/BSU01060___ybxB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00207___ybxB-BSU01060___ybxB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00207___ybxB-BSU01060___ybxB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00207___ybxB
# 2: BSU01060___ybxB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 606
# Identity:     593/606 (97.9%)
# Similarity:   593/606 (97.9%)
# Gaps:           0/606 ( 0.0%)
# Score: 2913.0
# 
#
#=======================================

BSNT_00207___      1 ATGAGTGAGCACTATTATTCAGAAAAACCTTCAGTGAAAAGCAACAAGCA     50
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU01060___yb      1 ATGAGTGAGCACTATTATTCAGAAAAACCTTCAGTAAAAAGCAACAAGCA     50

BSNT_00207___     51 AACCTGGTCTTTTAGGCTTCGGAATAAAGATTTCACGTTTACCAGCGACA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01060___yb     51 AACCTGGTCTTTTAGGCTTCGGAATAAAGATTTCACGTTTACCAGCGACA    100

BSNT_00207___    101 GCGGGGTTTTTTCTAAAAAAGAAGTTGATTTCGGCTCCCGCCTGCTGATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01060___yb    101 GCGGGGTTTTTTCTAAAAAAGAAGTTGATTTCGGCTCCCGCCTGCTGATT    150

BSNT_00207___    151 GATTCTTTTGAAGAGCCTGAGGTTGAGGGCAGCTTTTTGGATGTAGGCTG    200
                     ||||||||||||||||||||||||||||||.||.||||.|||||||||||
BSU01060___yb    151 GATTCTTTTGAAGAGCCTGAGGTTGAGGGCGGCATTTTAGATGTAGGCTG    200

BSNT_00207___    201 CGGGTACGGCCCGATTGGTTTATCGCTGGCCAGCGACTTTAAAGACCGGA    250
                     |||.|||||||||||||||||||||||.||||||||||||||||||||||
BSU01060___yb    201 CGGATACGGCCCGATTGGTTTATCGCTCGCCAGCGACTTTAAAGACCGGA    250

BSNT_00207___    251 CTATCCACATGATTGACGTTAATGAGAGAGCCGTAGAACTATCAAATGAA    300
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU01060___yb    251 CCATCCACATGATTGACGTTAATGAGAGAGCCGTAGAACTATCAAATGAA    300

BSNT_00207___    301 AATGCGGAACAAAACGGAATAACAAATGTTAAGATTTATCAAAGCGATTT    350
                     |||||||||||.||||||||||||||.|||||||||||||||||||||||
BSU01060___yb    301 AATGCGGAACAGAACGGAATAACAAACGTTAAGATTTATCAAAGCGATTT    350

BSNT_00207___    351 GTTTTCAAACATTGATTCTGCTCAAACATTTGCTTCTATTCTTACAAATC    400
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU01060___yb    351 GTTTTCAAACGTTGATTCTGCTCAAACATTTGCTTCTATTCTTACAAATC    400

BSNT_00207___    401 CCCCAATCCGAGCCGGAAAAAAAGTTGTCCATGCTATCTTTGAGAAAAGC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01060___yb    401 CCCCAATCCGAGCCGGAAAAAAAGTTGTCCATGCTATCTTTGAGAAAAGC    450

BSNT_00207___    451 GCTGAACACTTAAAAGCTTCAGGTGAATTGTGGATCGTCATACAGAAAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01060___yb    451 GCTGAACACTTAAAAGCTTCAGGTGAATTGTGGATCGTCATACAGAAAAA    500

BSNT_00207___    501 GCAGGGCGCGCCTTCTGCCATTGAAAAGCTCGAGGAACTGTTCGATGAGG    550
                     |||.||||||||||||||||||||||||||||||||||||||||||||.|
BSU01060___yb    501 GCAAGGCGCGCCTTCTGCCATTGAAAAGCTCGAGGAACTGTTCGATGAAG    550

BSNT_00207___    551 TTTCTGTCGTTCAAAAAAAGAAAGGCTATTATATCATAAAAGCAAAAAAA    600
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU01060___yb    551 TTTCCGTCGTTCAAAAAAAGAAAGGCTATTATATCATAAAAGCAAAAAAA    600

BSNT_00207___    601 GTTTGA    606
                     ||||||
BSU01060___yb    601 GTTTGA    606


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.