Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_00198 and BSU00990

See Amino acid alignment / Visit BSNT_00198 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:08
# Commandline: needle
#    -asequence dna-align/BSNT_00198___rpmG.1.22522.seq
#    -bsequence dna-align/BSU00990___rpmGB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00198___rpmG-BSU00990___rpmGB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00198___rpmG-BSU00990___rpmGB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00198___rpmG
# 2: BSU00990___rpmGB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:     150/150 (100.0%)
# Similarity:   150/150 (100.0%)
# Gaps:           0/150 ( 0.0%)
# Score: 750.0
# 
#
#=======================================

BSNT_00198___      1 ATGAGAAAAAAGATTACGTTAGCATGCAAGACATGCGGAAACCGTAATTA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00990___rp      1 ATGAGAAAAAAGATTACGTTAGCATGCAAGACATGCGGAAACCGTAATTA     50

BSNT_00198___     51 TACGACAATGAAGAGCTCTGCATCAGCGGCTGAGCGATTAGAAGTAAAGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00990___rp     51 TACGACAATGAAGAGCTCTGCATCAGCGGCTGAGCGATTAGAAGTAAAGA    100

BSNT_00198___    101 AATACTGCAGTACTTGCAATTCACATACAGCTCATCTTGAAACAAAATAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00990___rp    101 AATACTGCAGTACTTGCAATTCACATACAGCTCATCTTGAAACAAAATAG    150


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.