Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00195 and BSU00960

See Amino acid alignment / Visit BSNT_00195 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:07
# Commandline: needle
#    -asequence dna-align/BSNT_00195___yacO.1.22522.seq
#    -bsequence dna-align/BSU00960___rlmB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00195___yacO-BSU00960___rlmB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00195___yacO-BSU00960___rlmB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00195___yacO
# 2: BSU00960___rlmB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 750
# Identity:     748/750 (99.7%)
# Similarity:   748/750 (99.7%)
# Gaps:           0/750 ( 0.0%)
# Score: 3732.0
# 
#
#=======================================

BSNT_00195___      1 ATGAGTCAGCAACATGATTACGTCATAGGGAAAAATGCAGTGATCGAGAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00960___rl      1 ATGAGTCAGCAACATGATTACGTCATAGGGAAAAATGCAGTGATCGAGAC     50

BSNT_00195___     51 GTTAAAATCTGATCGGAAGCTGTATAAGCTGTGGATGGCGGAAAACACCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00960___rl     51 GTTAAAATCTGATCGGAAGCTGTATAAGCTGTGGATGGCGGAAAACACCG    100

BSNT_00195___    101 TAAAGGGACAAGCACAGCAAGTGATTGAGCTTGCCAAAAAGCAGGGAATC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00960___rl    101 TAAAGGGACAAGCACAGCAAGTGATTGAGCTTGCCAAAAAGCAGGGAATC    150

BSNT_00195___    151 ACGATTCAATACGTCCCGAGAAAAAAACTCGATCAAATGGTGACAGGACA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00960___rl    151 ACGATTCAATACGTCCCGAGAAAAAAACTCGATCAAATGGTGACAGGACA    200

BSNT_00195___    201 GCATCAGGGCGTAGTGGCACAGGTTGCAGCGTATGAATATGCAGAACTGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00960___rl    201 GCATCAGGGCGTAGTGGCACAGGTTGCAGCGTATGAATATGCAGAACTGG    250

BSNT_00195___    251 ACGATTTATATAAAGCAGCCGAAGAAAAAAATGAACAGCCTTTCTTCCTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00960___rl    251 ACGATTTATATAAAGCAGCCGAAGAAAAAAATGAACAGCCTTTCTTCCTC    300

BSNT_00195___    301 ATTCTGGACGAGCTTGAAGACCCTCATAACCTTGGTTCCATTATGAGGAC    350
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU00960___rl    301 ATTCTGGACGAGCTTGAAGACCCTCATAATCTTGGTTCCATTATGAGGAC    350

BSNT_00195___    351 AGCAGATGCGGTCGGCGCTCATGGCATCGTCATTCCAAAACGGAGAGCTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00960___rl    351 AGCAGATGCGGTCGGCGCTCATGGCATCGTCATTCCAAAACGGAGAGCTG    400

BSNT_00195___    401 TCGGGCTGACAACAACAGTGGCAAAAGCTTCAACAGGAGCAATTGAGCAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00960___rl    401 TCGGGCTGACAACAACAGTGGCAAAAGCTTCAACAGGAGCAATTGAGCAC    450

BSNT_00195___    451 ATTCCTGTAGCAAGAGTCACCAATTTGGCACGGACGTTAGAAGAGATGAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00960___rl    451 ATTCCTGTAGCAAGAGTCACCAATTTGGCACGGACGTTAGAAGAGATGAA    500

BSNT_00195___    501 AGAGCGGGGAATCTGGGTTGTCGGAACGGATGCGTCCGCGCGTGAGGATT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00960___rl    501 AGAGCGGGGAATCTGGGTTGTCGGAACGGATGCGTCCGCGCGTGAGGATT    550

BSNT_00195___    551 ACCGTAATATGGACGGCAATATGCCTTTGGCTCTAGTCATCGGAAGTGAA    600
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU00960___rl    551 TCCGTAATATGGACGGCAATATGCCTTTGGCTCTAGTCATCGGAAGTGAA    600

BSNT_00195___    601 GGAAAAGGGATGGGCCGCCTTGTGAAGGAAAAGTGCGATTTTCTCATTAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00960___rl    601 GGAAAAGGGATGGGCCGCCTTGTGAAGGAAAAGTGCGATTTTCTCATTAA    650

BSNT_00195___    651 ACTCCCGATGGCCGGAAAGGTAACTTCACTAAATGCATCTGTCGCGGCTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00960___rl    651 ACTCCCGATGGCCGGAAAGGTAACTTCACTAAATGCATCTGTCGCGGCTG    700

BSNT_00195___    701 GTCTTTTGATGTATGAAGTCTACCGGAAACGAAACCCTGTGGGAGAATAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00960___rl    701 GTCTTTTGATGTATGAAGTCTACCGGAAACGAAACCCTGTGGGAGAATAA    750


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