Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00180 and BSU00870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:06
# Commandline: needle
# -asequence dna-align/BSNT_00180___radA.1.22522.seq
# -bsequence dna-align/BSU00870___radA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00180___radA-BSU00870___radA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00180___radA-BSU00870___radA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00180___radA
# 2: BSU00870___radA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1377
# Identity: 1365/1377 (99.1%)
# Similarity: 1365/1377 (99.1%)
# Gaps: 0/1377 ( 0.0%)
# Score: 6777.0
#
#
#=======================================
BSNT_00180___ 1 ATGGCTAAAACAAAATCGAAATTCATCTGCCAATCCTGCGGCTACGAGTC 50
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU00870___ra 1 ATGGCTAAAACAAAATCGAAGTTCATCTGCCAATCCTGCGGCTACGAGTC 50
BSNT_00180___ 51 TCCAAAATGGATGGGGAAATGTCCGGGCTGCGGTGCTTGGAATACAATGG 100
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU00870___ra 51 TCCAAAATGGATGGGGAAATGTCCGGGCTGTGGTGCTTGGAATACAATGG 100
BSNT_00180___ 101 TGGAAGAAATGATTAAAAAAGCACCGGCCAATCGGAGAGCGGCTTTTTCT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 101 TGGAAGAAATGATTAAAAAAGCACCGGCCAATCGGAGAGCGGCTTTTTCT 150
BSNT_00180___ 151 CATTCTGTTCAAACTGTACAGAAACCTTCACCTATTACATCAATCGAAAC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 151 CATTCTGTTCAAACTGTACAGAAACCTTCACCTATTACATCAATCGAAAC 200
BSNT_00180___ 201 ATCAGAAGAACCCCGCGTCAAAACCCAGCTTGGCGAGTTTAACAGAGTAC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 201 ATCAGAAGAACCCCGCGTCAAAACCCAGCTTGGCGAGTTTAACAGAGTAC 250
BSNT_00180___ 251 TCGGCGGAGGTGTCGTTAAAGGCTCCCTCGTTTTAATTGGCGGTGATCCT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 251 TCGGCGGAGGTGTCGTTAAAGGCTCCCTCGTTTTAATTGGCGGTGATCCT 300
BSNT_00180___ 301 GGTATCGGAAAGTCAACGCTATTACTGCAGGTTTCCGCTCAATTATCAGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 301 GGTATCGGAAAGTCAACGCTATTACTGCAGGTTTCCGCTCAATTATCAGG 350
BSNT_00180___ 351 CTCATCAAACAGTGTCCTGTATATTTCGGGAGAAGAATCTGTAAAGCAAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 351 CTCATCAAACAGTGTCCTGTATATTTCGGGAGAAGAATCTGTAAAGCAAA 400
BSNT_00180___ 401 CGAAGCTGCGAGCAGACCGTCTGGGCATTAATAATCCGTCACTGCATGTT 450
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU00870___ra 401 CGAAGCTGCGAGCAGACCGTCTCGGCATTAATAATCCGTCACTGCATGTT 450
BSNT_00180___ 451 TTATCTGAAACCGATATGGAGTATATTTCGTCTGCTATACAAGAGATGAA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 451 TTATCTGAAACCGATATGGAGTATATTTCGTCTGCTATACAAGAGATGAA 500
BSNT_00180___ 501 TCCAGCGTTTGTCGTTGTTGACTCTATTCAAACGGTTTACCAAAGCGATA 550
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 501 TCCATCGTTTGTCGTTGTTGACTCTATTCAAACGGTTTACCAAAGCGATA 550
BSNT_00180___ 551 TTACATCGGCTCCAGGCAGTGTGTCACAGGTCAGAGAATGTACTGCTGAG 600
|||||||.|||||||||||||||||||||||||||||||||||.||||||
BSU00870___ra 551 TTACATCTGCTCCAGGCAGTGTGTCACAGGTCAGAGAATGTACCGCTGAG 600
BSNT_00180___ 601 CTGATGAAAATCGCAAAAACAAAAGGTATTCCGATTTTTATCGTAGGGCA 650
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU00870___ra 601 CTGATGAAAATTGCAAAAACAAAAGGTATTCCGATTTTTATCGTAGGGCA 650
BSNT_00180___ 651 CGTGACGAAAGAAGGGTCTATTGCAGGTCCGAGACTGTTGGAGCATATGG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 651 CGTGACGAAAGAAGGGTCTATTGCAGGTCCGAGACTGTTGGAGCATATGG 700
BSNT_00180___ 701 TTGACACTGTTTTATATTTTGAAGGAGAACGCCACCATACTTTCCGTATT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 701 TTGACACTGTTTTATATTTTGAAGGAGAACGCCACCATACTTTCCGTATT 750
BSNT_00180___ 751 TTGCGGGCTGTAAAAAACCGTTTCGGATCTACAAACGAAATGGGCATTTT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 751 TTGCGGGCTGTAAAAAACCGTTTCGGATCTACAAACGAAATGGGCATTTT 800
BSNT_00180___ 801 CGAAATGCGGGAAGAGGGGCTCACTGAGGTTTTGAATCCTTCGGAAATTT 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 801 CGAAATGCGGGAAGAGGGGCTCACTGAGGTTTTGAATCCTTCGGAAATTT 850
BSNT_00180___ 851 TCTTAGAAGAACGCTCTGCTGGTTCCGCAGGCTCGAGTATCACTGCCTCT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 851 TCTTAGAAGAACGCTCTGCTGGTTCCGCAGGCTCGAGTATCACTGCCTCT 900
BSNT_00180___ 901 ATGGAGGGCACTAGACCGATTCTCGTTGAAATTCAGGCGCTCATCTCGCC 950
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU00870___ra 901 ATGGAGGGCACTAGACCGATTCTCGTTGAAATTCAGGCACTCATCTCGCC 950
BSNT_00180___ 951 AACAAGCTTTGGCAACCCAAGGCGTATGGCAACGGGAATAGACCATAACA 1000
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 951 AACAAGTTTTGGCAACCCAAGGCGTATGGCAACGGGAATAGACCATAACA 1000
BSNT_00180___ 1001 GGGTTTCTCTGTTAATGGCTGTGTTAGAAAAAAGAGTTGGACTGCTGCTG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 1001 GGGTTTCTCTGTTAATGGCTGTGTTAGAAAAAAGAGTTGGACTGCTGCTG 1050
BSNT_00180___ 1051 CAAAATCAGGATGCTTATTTGAAAGTGGCTGGCGGCGTTAAGCTTGATGA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 1051 CAAAATCAGGATGCTTATTTGAAAGTGGCTGGCGGCGTTAAGCTTGATGA 1100
BSNT_00180___ 1101 ACCGGCAATTGATCTTGCGATTGTGATTAGTATCGCATCAAGCTTTAGAG 1150
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU00870___ra 1101 ACCGGCAATTGATCTTGCGATTGTGATTAGTATTGCATCAAGCTTTAGAG 1150
BSNT_00180___ 1151 ACACACCTCCAAATCCTGCAGATTGTTTTATTGGAGAAGTGGGATTAACC 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 1151 ACACACCTCCAAATCCTGCAGATTGTTTTATTGGAGAAGTGGGATTAACC 1200
BSNT_00180___ 1201 GGAGAAGTCCGGCGGGTTTCAAGAATTGAACAGCGTGTGAAAGAAGCGGC 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 1201 GGAGAAGTCCGGCGGGTTTCAAGAATTGAACAGCGTGTGAAAGAAGCGGC 1250
BSNT_00180___ 1251 AAAGCTTGGCTTTAAACGCATGATCATACCCGCGGCAAATCTGGACGGAT 1300
|||||||||.|||||||||||||||||||||||||||||||||||.||||
BSU00870___ra 1251 AAAGCTTGGTTTTAAACGCATGATCATACCCGCGGCAAATCTGGATGGAT 1300
BSNT_00180___ 1301 GGACAAAACCAAAAGGGATTGAGGTTATCGGAGTAGCAAATGTTGCAGAA 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra 1301 GGACAAAACCAAAAGGGATTGAGGTTATCGGAGTAGCAAATGTTGCAGAA 1350
BSNT_00180___ 1351 GCGCTTCGTACTTCATTAGGAGGATAA 1377
|||||||||||||||||||||||||||
BSU00870___ra 1351 GCGCTTCGTACTTCATTAGGAGGATAA 1377
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