Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00180 and BSU00870

See Amino acid alignment / Visit BSNT_00180 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:06
# Commandline: needle
#    -asequence dna-align/BSNT_00180___radA.1.22522.seq
#    -bsequence dna-align/BSU00870___radA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00180___radA-BSU00870___radA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00180___radA-BSU00870___radA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00180___radA
# 2: BSU00870___radA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1377
# Identity:    1365/1377 (99.1%)
# Similarity:  1365/1377 (99.1%)
# Gaps:           0/1377 ( 0.0%)
# Score: 6777.0
# 
#
#=======================================

BSNT_00180___      1 ATGGCTAAAACAAAATCGAAATTCATCTGCCAATCCTGCGGCTACGAGTC     50
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU00870___ra      1 ATGGCTAAAACAAAATCGAAGTTCATCTGCCAATCCTGCGGCTACGAGTC     50

BSNT_00180___     51 TCCAAAATGGATGGGGAAATGTCCGGGCTGCGGTGCTTGGAATACAATGG    100
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU00870___ra     51 TCCAAAATGGATGGGGAAATGTCCGGGCTGTGGTGCTTGGAATACAATGG    100

BSNT_00180___    101 TGGAAGAAATGATTAAAAAAGCACCGGCCAATCGGAGAGCGGCTTTTTCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra    101 TGGAAGAAATGATTAAAAAAGCACCGGCCAATCGGAGAGCGGCTTTTTCT    150

BSNT_00180___    151 CATTCTGTTCAAACTGTACAGAAACCTTCACCTATTACATCAATCGAAAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra    151 CATTCTGTTCAAACTGTACAGAAACCTTCACCTATTACATCAATCGAAAC    200

BSNT_00180___    201 ATCAGAAGAACCCCGCGTCAAAACCCAGCTTGGCGAGTTTAACAGAGTAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra    201 ATCAGAAGAACCCCGCGTCAAAACCCAGCTTGGCGAGTTTAACAGAGTAC    250

BSNT_00180___    251 TCGGCGGAGGTGTCGTTAAAGGCTCCCTCGTTTTAATTGGCGGTGATCCT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra    251 TCGGCGGAGGTGTCGTTAAAGGCTCCCTCGTTTTAATTGGCGGTGATCCT    300

BSNT_00180___    301 GGTATCGGAAAGTCAACGCTATTACTGCAGGTTTCCGCTCAATTATCAGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra    301 GGTATCGGAAAGTCAACGCTATTACTGCAGGTTTCCGCTCAATTATCAGG    350

BSNT_00180___    351 CTCATCAAACAGTGTCCTGTATATTTCGGGAGAAGAATCTGTAAAGCAAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra    351 CTCATCAAACAGTGTCCTGTATATTTCGGGAGAAGAATCTGTAAAGCAAA    400

BSNT_00180___    401 CGAAGCTGCGAGCAGACCGTCTGGGCATTAATAATCCGTCACTGCATGTT    450
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU00870___ra    401 CGAAGCTGCGAGCAGACCGTCTCGGCATTAATAATCCGTCACTGCATGTT    450

BSNT_00180___    451 TTATCTGAAACCGATATGGAGTATATTTCGTCTGCTATACAAGAGATGAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra    451 TTATCTGAAACCGATATGGAGTATATTTCGTCTGCTATACAAGAGATGAA    500

BSNT_00180___    501 TCCAGCGTTTGTCGTTGTTGACTCTATTCAAACGGTTTACCAAAGCGATA    550
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra    501 TCCATCGTTTGTCGTTGTTGACTCTATTCAAACGGTTTACCAAAGCGATA    550

BSNT_00180___    551 TTACATCGGCTCCAGGCAGTGTGTCACAGGTCAGAGAATGTACTGCTGAG    600
                     |||||||.|||||||||||||||||||||||||||||||||||.||||||
BSU00870___ra    551 TTACATCTGCTCCAGGCAGTGTGTCACAGGTCAGAGAATGTACCGCTGAG    600

BSNT_00180___    601 CTGATGAAAATCGCAAAAACAAAAGGTATTCCGATTTTTATCGTAGGGCA    650
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU00870___ra    601 CTGATGAAAATTGCAAAAACAAAAGGTATTCCGATTTTTATCGTAGGGCA    650

BSNT_00180___    651 CGTGACGAAAGAAGGGTCTATTGCAGGTCCGAGACTGTTGGAGCATATGG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra    651 CGTGACGAAAGAAGGGTCTATTGCAGGTCCGAGACTGTTGGAGCATATGG    700

BSNT_00180___    701 TTGACACTGTTTTATATTTTGAAGGAGAACGCCACCATACTTTCCGTATT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra    701 TTGACACTGTTTTATATTTTGAAGGAGAACGCCACCATACTTTCCGTATT    750

BSNT_00180___    751 TTGCGGGCTGTAAAAAACCGTTTCGGATCTACAAACGAAATGGGCATTTT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra    751 TTGCGGGCTGTAAAAAACCGTTTCGGATCTACAAACGAAATGGGCATTTT    800

BSNT_00180___    801 CGAAATGCGGGAAGAGGGGCTCACTGAGGTTTTGAATCCTTCGGAAATTT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra    801 CGAAATGCGGGAAGAGGGGCTCACTGAGGTTTTGAATCCTTCGGAAATTT    850

BSNT_00180___    851 TCTTAGAAGAACGCTCTGCTGGTTCCGCAGGCTCGAGTATCACTGCCTCT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra    851 TCTTAGAAGAACGCTCTGCTGGTTCCGCAGGCTCGAGTATCACTGCCTCT    900

BSNT_00180___    901 ATGGAGGGCACTAGACCGATTCTCGTTGAAATTCAGGCGCTCATCTCGCC    950
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU00870___ra    901 ATGGAGGGCACTAGACCGATTCTCGTTGAAATTCAGGCACTCATCTCGCC    950

BSNT_00180___    951 AACAAGCTTTGGCAACCCAAGGCGTATGGCAACGGGAATAGACCATAACA   1000
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra    951 AACAAGTTTTGGCAACCCAAGGCGTATGGCAACGGGAATAGACCATAACA   1000

BSNT_00180___   1001 GGGTTTCTCTGTTAATGGCTGTGTTAGAAAAAAGAGTTGGACTGCTGCTG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra   1001 GGGTTTCTCTGTTAATGGCTGTGTTAGAAAAAAGAGTTGGACTGCTGCTG   1050

BSNT_00180___   1051 CAAAATCAGGATGCTTATTTGAAAGTGGCTGGCGGCGTTAAGCTTGATGA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra   1051 CAAAATCAGGATGCTTATTTGAAAGTGGCTGGCGGCGTTAAGCTTGATGA   1100

BSNT_00180___   1101 ACCGGCAATTGATCTTGCGATTGTGATTAGTATCGCATCAAGCTTTAGAG   1150
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU00870___ra   1101 ACCGGCAATTGATCTTGCGATTGTGATTAGTATTGCATCAAGCTTTAGAG   1150

BSNT_00180___   1151 ACACACCTCCAAATCCTGCAGATTGTTTTATTGGAGAAGTGGGATTAACC   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra   1151 ACACACCTCCAAATCCTGCAGATTGTTTTATTGGAGAAGTGGGATTAACC   1200

BSNT_00180___   1201 GGAGAAGTCCGGCGGGTTTCAAGAATTGAACAGCGTGTGAAAGAAGCGGC   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra   1201 GGAGAAGTCCGGCGGGTTTCAAGAATTGAACAGCGTGTGAAAGAAGCGGC   1250

BSNT_00180___   1251 AAAGCTTGGCTTTAAACGCATGATCATACCCGCGGCAAATCTGGACGGAT   1300
                     |||||||||.|||||||||||||||||||||||||||||||||||.||||
BSU00870___ra   1251 AAAGCTTGGTTTTAAACGCATGATCATACCCGCGGCAAATCTGGATGGAT   1300

BSNT_00180___   1301 GGACAAAACCAAAAGGGATTGAGGTTATCGGAGTAGCAAATGTTGCAGAA   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00870___ra   1301 GGACAAAACCAAAAGGGATTGAGGTTATCGGAGTAGCAAATGTTGCAGAA   1350

BSNT_00180___   1351 GCGCTTCGTACTTCATTAGGAGGATAA   1377
                     |||||||||||||||||||||||||||
BSU00870___ra   1351 GCGCTTCGTACTTCATTAGGAGGATAA   1377


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