Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00178 and BSU00860
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:06
# Commandline: needle
# -asequence dna-align/BSNT_00178___clpC.1.22522.seq
# -bsequence dna-align/BSU00860___clpC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00178___clpC-BSU00860___clpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00178___clpC-BSU00860___clpC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00178___clpC
# 2: BSU00860___clpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2433
# Identity: 2414/2433 (99.2%)
# Similarity: 2414/2433 (99.2%)
# Gaps: 0/2433 ( 0.0%)
# Score: 11994.0
#
#
#=======================================
BSNT_00178___ 1 ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTAGC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 1 ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTAGC 50
BSNT_00178___ 51 ACAGGAAGAAGCACTTCGGTTAGGTCATAATAACATTGGCACTGAGCATA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 51 ACAGGAAGAAGCACTTCGGTTAGGTCATAATAACATTGGCACTGAGCATA 100
BSNT_00178___ 101 TTTTATTAGGACTGGTAAGAGAAGGAGAGGGCATTGCTGCTAAAGCTCTT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 101 TTTTATTAGGACTGGTAAGAGAAGGAGAGGGCATTGCTGCTAAAGCTCTT 150
BSNT_00178___ 151 CAAGCGCTTGGACTCGGTTCAGATAAAATTCAGAAAGAAGTAGAAAGTTT 200
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU00860___cl 151 CAAGCGCTTGGACTCGGTTCAGAAAAAATTCAGAAAGAAGTAGAAAGTTT 200
BSNT_00178___ 201 GATCGGGCGCGGGCAGGAAATGTCTCAAACGATTCATTATACTCCTAGAG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 201 GATCGGGCGCGGGCAGGAAATGTCTCAAACGATTCATTATACTCCTAGAG 250
BSNT_00178___ 251 CTAAAAAAGTCATTGAGCTTTCAATGGATGAGGCAAGAAAACTCGGTCAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 251 CTAAAAAAGTCATTGAGCTTTCAATGGATGAGGCAAGAAAACTCGGTCAT 300
BSNT_00178___ 301 TCTTATGTTGGAACAGAACATATTCTTCTTGGTCTGATTCGTGAAGGAGA 350
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 301 TCTTATGTGGGAACAGAACATATTCTTCTTGGTCTGATTCGTGAAGGAGA 350
BSNT_00178___ 351 AGGTGTTGCTGCGAGAGTTCTGAATAATCTCGGTGTCAGCTTAAATAAAG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 351 AGGTGTTGCTGCGAGAGTTCTGAATAATCTCGGTGTCAGCTTAAATAAAG 400
BSNT_00178___ 401 CAAGACAGCAGGTGCTCCAGCTTCTAGGAAGTAATGAAACAGGATCATCA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 401 CAAGACAGCAGGTGCTCCAGCTTCTAGGAAGTAATGAAACAGGATCATCA 450
BSNT_00178___ 451 GCGGCAGGAACAAACAGCAATGCGAATACGCCTACTCTTGACAGCTTGGC 500
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU00860___cl 451 GCGGCAGGAACAAACAGCAATGCGAATACGCCTACGCTTGACAGCTTGGC 500
BSNT_00178___ 501 AAGAGACTTAACTGCTATTGCGAAGGAAGACAGCCTTGACCCTGTAATCG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 501 AAGAGACTTAACTGCTATTGCGAAGGAAGACAGCCTTGACCCTGTAATCG 550
BSNT_00178___ 551 GCAGAAGCAAGGAGATCCAGCGTGTCATTGAAGTGTTAAGCCGCAGAACG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 551 GCAGAAGCAAGGAGATCCAGCGTGTCATTGAAGTGTTAAGCCGCAGAACG 600
BSNT_00178___ 601 AAAAACAACCCTGTTCTCATTGGGGAACCAGGTGTAGGTAAAACGGCTAT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 601 AAAAACAACCCTGTTCTCATTGGGGAACCAGGTGTAGGTAAAACGGCTAT 650
BSNT_00178___ 651 CGCAGAAGGTTTGGCACAGCAAATTATCAATAATGAAGTACCCGAAATTT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 651 CGCAGAAGGTTTGGCACAGCAAATTATCAATAATGAAGTACCCGAAATTT 700
BSNT_00178___ 701 TGCGTGATAAACGTGTGATGACATTAGACATGGGAACAGTTGTTGCCGGC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 701 TGCGTGATAAACGTGTGATGACATTAGACATGGGAACAGTTGTTGCCGGC 750
BSNT_00178___ 751 ACAAAATACCGCGGAGAATTTGAGGATCGCCTGAAGAAGGTCATGGATGA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 751 ACAAAATACCGCGGAGAATTTGAGGATCGCCTGAAGAAGGTCATGGATGA 800
BSNT_00178___ 801 AATTCGCCAGGCAGGAAATATCATTCTATTCATCGATGAGCTCCATACAT 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 801 AATTCGCCAGGCAGGAAATATCATTCTATTCATCGATGAGCTCCATACAT 850
BSNT_00178___ 851 TAATCGGGGCAGGCGGAGCAGAAGGTGCTATTGATGCATCTAATATTTTA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 851 TAATCGGGGCAGGCGGAGCAGAAGGTGCTATTGATGCATCTAATATTTTA 900
BSNT_00178___ 901 AAACCTTCACTTGCTCGTGGCGAACTCCAATGTATTGGTGCAACGACTCT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 901 AAACCTTCACTTGCTCGTGGCGAACTCCAATGTATTGGTGCAACGACTCT 950
BSNT_00178___ 951 TGATGAGTACCGTAAATATATTGAAAAAGATGCAGCACTGGAACGCCGTT 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 951 TGATGAGTACCGTAAATATATTGAAAAAGATGCAGCACTGGAACGCCGTT 1000
BSNT_00178___ 1001 TTCAGCCGATTCAGGTTGATCAGCCATCTGTAGATGAAAGTATTCAAATT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 1001 TTCAGCCGATTCAGGTTGATCAGCCATCTGTAGATGAAAGTATTCAAATT 1050
BSNT_00178___ 1051 TTACAAGGTCTGCGTGACAGATACGAAGCCCACCACCGCGTTTCTATCAC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 1051 TTACAAGGTCTGCGTGACAGATACGAAGCCCACCACCGCGTTTCTATCAC 1100
BSNT_00178___ 1101 TGATGATGCCATTGAAGCTGCGGTTAAGCTTTCTGACAGATATATTTCTG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 1101 TGATGATGCCATTGAAGCTGCGGTTAAGCTTTCTGACAGATATATTTCTG 1150
BSNT_00178___ 1151 ACCGCTTCCTTCCGGATAAAGCAATTGACTTGATCGATGAAGCAGGTTCA 1200
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU00860___cl 1151 ACCGCTTCCTTCCGGATAAAGCAATTGACTTGATCGATGAAGCGGGTTCA 1200
BSNT_00178___ 1201 AAGGTGAGACTGCGCTCATTTACAACGCCTCCTAACTTAAAAGAGCTTGA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 1201 AAGGTGAGACTGCGCTCATTTACAACGCCTCCTAACTTAAAAGAGCTTGA 1250
BSNT_00178___ 1251 GCAGAAGCTTGATGAGGTTCGTAAAGAGAAGGATGCGGCAGTGCAAAGCC 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 1251 GCAGAAGCTTGATGAGGTTCGTAAAGAGAAGGATGCGGCAGTGCAAAGCC 1300
BSNT_00178___ 1301 AAGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAACAACGCCTGCGC 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 1301 AAGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAACAACGCCTGCGC 1350
BSNT_00178___ 1351 GAGCAAGTAGAGGATACGAAGAAATCATGGAAAGAGAAGCAAGGGCAGGA 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 1351 GAGCAAGTAGAGGATACGAAGAAATCATGGAAAGAGAAGCAAGGGCAGGA 1400
BSNT_00178___ 1401 AAACTCAGAGGTTACTGTGGATGATATTGCGATGGTTGTATCCAGCTGGA 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 1401 AAACTCAGAGGTTACTGTGGATGATATTGCGATGGTTGTATCCAGCTGGA 1450
BSNT_00178___ 1451 CCGGTGTGCCTGTATCTAAAATCGCCCAAACTGAAACTGATAAGCTTCTC 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 1451 CCGGTGTGCCTGTATCTAAAATCGCCCAAACTGAAACTGATAAGCTTCTC 1500
BSNT_00178___ 1501 AATATGGAAAACATTCTTCATTCCCGCGTCATCGGCCAGGATGAAGCAGT 1550
||||||||||||||||||||.|||||.|||||||||||||||||||||||
BSU00860___cl 1501 AATATGGAAAACATTCTTCACTCCCGTGTCATCGGCCAGGATGAAGCAGT 1550
BSNT_00178___ 1551 TGTAGCTGTTGCAAAAGCCGTCAGACGTGCGAGAGCAGGATTGAAAGATC 1600
||||||.|||||||||||||||||||||||.|||||||||||||||||||
BSU00860___cl 1551 TGTAGCGGTTGCAAAAGCCGTCAGACGTGCAAGAGCAGGATTGAAAGATC 1600
BSNT_00178___ 1601 CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTAGGT 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 1601 CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTAGGT 1650
BSNT_00178___ 1651 AAAACAGAGCTTGCACGAGCACTCGCTGAATCCATTTTTGGTGATGAAGA 1700
||||||||.||||||||||||||.|||||||||||||||||.||||||||
BSU00860___cl 1651 AAAACAGAACTTGCACGAGCACTTGCTGAATCCATTTTTGGCGATGAAGA 1700
BSNT_00178___ 1701 ATCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTT 1750
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU00860___cl 1701 ATCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACATTCAACTT 1750
BSNT_00178___ 1751 CAAGACTTGTTGGTTCACCTCCGGGGTATGTGGGATATGATGAAGGCGGT 1800
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU00860___cl 1751 CAAGACTTGTTGGTTCACCTCCGGGTTATGTGGGATATGATGAAGGCGGT 1800
BSNT_00178___ 1801 CAATTGACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCGTGCTTCTTGA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 1801 CAATTGACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCGTGCTTCTTGA 1850
BSNT_00178___ 1851 TGAGATCGAGAAAGCGCACCCTGATGTCTTCAATATCCTTCTGCAAGTTC 1900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 1851 TGAGATCGAGAAAGCGCACCCTGATGTCTTCAATATCCTTCTGCAAGTTC 1900
BSNT_00178___ 1901 TTGAAGACGGACGATTGACTGATTCTAAAGGACGCACAGTCGATTTCCGC 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 1901 TTGAAGACGGACGATTGACTGATTCTAAAGGACGCACAGTCGATTTCCGC 1950
BSNT_00178___ 1951 AATACCATTCTGATCATGACATCAAACGTCGGAGCAAGTGAGCTGAAACG 2000
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU00860___cl 1951 AATACCATTCTGATCATGACATCAAACGTCGGAGCAAGTGAGCTAAAACG 2000
BSNT_00178___ 2001 CAATAAATATGTCGGCTTTAACGTTCAGGATGAAACTCAAAATCATAAAG 2050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 2001 CAATAAATATGTCGGCTTTAACGTTCAGGATGAAACTCAAAATCATAAAG 2050
BSNT_00178___ 2051 ACATGAAAGACAAAGTGATGGGTGAATTAAAACGAGCGTTCAGACCTGAG 2100
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU00860___cl 2051 ACATGAAAGATAAAGTGATGGGTGAATTAAAACGAGCGTTCAGACCTGAG 2100
BSNT_00178___ 2101 TTCATCAACCGTATCGATGAAATCATTGTCTTCCATTCACTTGAGAAAAA 2150
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU00860___cl 2101 TTCATCAACCGTATTGATGAAATCATTGTCTTCCATTCACTTGAGAAAAA 2150
BSNT_00178___ 2151 ACATCTTACTGAAATTGTGTCATTAATGTCTGATCAATTAACGAAACGCT 2200
||||||.|||||.||||||||||||||||||||||||||||||||||||.
BSU00860___cl 2151 ACATCTCACTGAGATTGTGTCATTAATGTCTGATCAATTAACGAAACGCC 2200
BSNT_00178___ 2201 TGAAAGAACAAGATCTTTCTATCGAATTGACAGATGCTGCAAAAGCGAAA 2250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 2201 TGAAAGAACAAGATCTTTCTATCGAATTGACAGATGCTGCAAAAGCGAAA 2250
BSNT_00178___ 2251 GTCGCGGAAGAGGGCGTTGACCTGGAATACGGTGCCCGTCCGTTAAGAAG 2300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 2251 GTCGCGGAAGAGGGCGTTGACCTGGAATACGGTGCCCGTCCGTTAAGAAG 2300
BSNT_00178___ 2301 AGCGATCCAAAAACATGTCGAGGATCGTTTATCTGAAGAACTCCTCAGAG 2350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 2301 AGCGATCCAAAAACATGTCGAGGATCGTTTATCTGAAGAACTCCTCAGAG 2350
BSNT_00178___ 2351 GAAATATTCATAAAGGACAGCATATTGTTCTTGATGTAGAAGATGGCGAA 2400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00860___cl 2351 GAAATATTCATAAAGGACAGCATATTGTTCTTGATGTAGAAGATGGCGAA 2400
BSNT_00178___ 2401 TTTGTCGTAAAAACGACTGCTAAAACGAATTAA 2433
|||||||||||||||||||||||||||||||||
BSU00860___cl 2401 TTTGTCGTAAAAACGACTGCTAAAACGAATTAA 2433
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