Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00174 and BSU00830

See Amino acid alignment / Visit BSNT_00174 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:05
# Commandline: needle
#    -asequence dna-align/BSNT_00174___ctsR.1.22522.seq
#    -bsequence dna-align/BSU00830___ctsR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00174___ctsR-BSU00830___ctsR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00174___ctsR-BSU00830___ctsR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00174___ctsR
# 2: BSU00830___ctsR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity:     464/465 (99.8%)
# Similarity:   464/465 (99.8%)
# Gaps:           0/465 ( 0.0%)
# Score: 2316.0
# 
#
#=======================================

BSNT_00174___      1 GTGGGACATAATATTTCTGACATCATTGAACAATATTTAAAACGAGTGTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00830___ct      1 GTGGGACATAATATTTCTGACATCATTGAACAATATTTAAAACGAGTGTT     50

BSNT_00174___     51 AGATCAAAATGGCAAGGAAATTTTAGAGATTAAACGAAGTGAAATTGCAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00830___ct     51 AGATCAAAATGGCAAGGAAATTTTAGAGATTAAACGAAGTGAAATTGCAG    100

BSNT_00174___    101 ATAAATTTCAATGCGTTCCTTCCCAAATAAATTATGTCATCAACACCAGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00830___ct    101 ATAAATTTCAATGCGTTCCTTCCCAAATAAATTATGTCATCAACACCAGA    150

BSNT_00174___    151 TTTACAAGCGAAAGAGGATATATTGTTGAGAGCAAACGCGGGGGCGGCGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00830___ct    151 TTTACAAGCGAAAGAGGATATATTGTTGAGAGCAAACGCGGGGGCGGCGG    200

BSNT_00174___    201 TTACATCAGAATCATTAAAATTAAAATGAACAATGAAGTTGTCCTGATCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00830___ct    201 TTACATCAGAATCATTAAAATTAAAATGAACAATGAAGTTGTCCTGATCA    250

BSNT_00174___    251 ATAATATAATTTCTCAAATTAATACCCATTTGTCTCAAGCAGCCTCTGAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00830___ct    251 ATAATATAATTTCTCAAATTAATACCCATTTGTCTCAAGCAGCCTCTGAT    300

BSNT_00174___    301 GACATTATTTTAAGGCTATTAGAAGACAAGGTAATTTCAGAAAGAGAAGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00830___ct    301 GACATTATTTTAAGGCTATTAGAAGACAAGGTAATTTCAGAAAGAGAAGC    350

BSNT_00174___    351 AAAAATGATGGTCAGTGTAATGGACCGCTCAGTTTTACACATTGACTTAC    400
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU00830___ct    351 AAAAATGATGGTCAGCGTAATGGACCGCTCAGTTTTACACATTGACTTAC    400

BSNT_00174___    401 CTGAACGTGATGAATTAAGAGCGAGAATGATGAAGGCAATGCTGACTTCT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00830___ct    401 CTGAACGTGATGAATTAAGAGCGAGAATGATGAAGGCAATGCTGACTTCT    450

BSNT_00174___    451 TTAAAATTAAAATAA    465
                     |||||||||||||||
BSU00830___ct    451 TTAAAATTAAAATAA    465


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