Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_00136 and BSU00790

See Amino acid alignment / Visit BSNT_00136 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:04
# Commandline: needle
#    -asequence dna-align/BSNT_00136___folK.1.22522.seq
#    -bsequence dna-align/BSU00790___folK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00136___folK-BSU00790___folK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00136___folK-BSU00790___folK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00136___folK
# 2: BSU00790___folK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 504
# Identity:     502/504 (99.6%)
# Similarity:   502/504 (99.6%)
# Gaps:           0/504 ( 0.0%)
# Score: 2502.0
# 
#
#=======================================

BSNT_00136___      1 ATGAACAACATAGCTTATATTGCACTTGGATCTAATATTGGAGATAGAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00790___fo      1 ATGAACAACATAGCTTATATTGCACTTGGATCTAATATTGGAGATAGAGA     50

BSNT_00136___     51 AACGTATTTAAGGCAAGCAGTGGCTTCACTGCATCAGCATGCTGCGGTGA    100
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU00790___fo     51 AACGTATTTAAGGCAAGCAGTGGCTTTACTGCATCAGCATGCTGCGGTGA    100

BSNT_00136___    101 CAGTCACTAAAGTGTCGTCTATTTACGAAACTGACCCGGTCGGATACGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00790___fo    101 CAGTCACTAAAGTGTCGTCTATTTACGAAACTGACCCGGTCGGATACGAA    150

BSNT_00136___    151 GATCAAGCTCAATTTTTGAATATGGCTGTTGAAATCAAGACATCATTGAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00790___fo    151 GATCAAGCTCAATTTTTGAATATGGCTGTTGAAATCAAGACATCATTGAA    200

BSNT_00136___    201 CCCTTTTGAACTCCTTGAACTGACGCAGCAGATAGAAAATGAATTAGGCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00790___fo    201 CCCTTTTGAACTCCTTGAACTGACGCAGCAGATAGAAAATGAATTAGGCA    250

BSNT_00136___    251 GAACAAGGGAAGTAAGATGGGGGCCGCGGACGGCAGACCTTGACATTTTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00790___fo    251 GAACAAGGGAAGTAAGATGGGGGCCGCGGACGGCAGACCTTGACATTTTG    300

BSNT_00136___    301 TTATTTAATCGTGAAAATATTGAATCAGAGCAACTAATTGTTCCGCATCC    350
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU00790___fo    301 TTATTTAATCGTGAAAATATTGAAACAGAGCAACTAATTGTTCCGCATCC    350

BSNT_00136___    351 GAGAATGTATGAGCGTTTGTTTGTCCTTGCGCCGCTTGCGGAAATTTGCC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00790___fo    351 GAGAATGTATGAGCGTTTGTTTGTCCTTGCGCCGCTTGCGGAAATTTGCC    400

BSNT_00136___    401 AGCAGGTTGAAAAAGAGGCTACAAGCGCCGAAACAGACCAAGAAGGTGTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00790___fo    401 AGCAGGTTGAAAAAGAGGCTACAAGCGCCGAAACAGACCAAGAAGGTGTA    450

BSNT_00136___    451 AGAGTATGGAAGCAGAAATCTGGGGTAGACGAATTCGTGCATTCAGAAAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00790___fo    451 AGAGTATGGAAGCAGAAATCTGGGGTAGACGAATTCGTGCATTCAGAAAG    500

BSNT_00136___    501 CTGA    504
                     ||||
BSU00790___fo    501 CTGA    504


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.