Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00126 and BSU00720

See Amino acid alignment / Visit BSNT_00126 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:03
# Commandline: needle
#    -asequence dna-align/BSNT_00126___yacD.1.22522.seq
#    -bsequence dna-align/BSU00720___yacD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00126___yacD-BSU00720___yacD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00126___yacD-BSU00720___yacD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00126___yacD
# 2: BSU00720___yacD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 894
# Identity:     886/894 (99.1%)
# Similarity:   886/894 (99.1%)
# Gaps:           0/894 ( 0.0%)
# Score: 4398.0
# 
#
#=======================================

BSNT_00126___      1 TTGAAATCAAGAACAATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00720___ya      1 TTGAAATCAAGAACAATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTG     50

BSNT_00126___     51 CTGTATTGCTGTTGCATATACGCTGACGAAATCCCAAACCGGCGCATCGT    100
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU00720___ya     51 CTGTATTGCTGTTGCATATACGCTGACGAAATCCCAAGCCGGCGCATCGT    100

BSNT_00126___    101 CATCCGGTGAGTCTATTGCGACTATCGGAGGCAAGAGTGTGACAAGAGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00720___ya    101 CATCCGGTGAGTCTATTGCGACTATCGGAGGCAAGAGTGTGACAAGAGAA    150

BSNT_00126___    151 GAATGGCTGAAAGAAATGGAAGATCAGTATGGTAAGTCAACGCTTGAAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00720___ya    151 GAATGGCTGAAAGAAATGGAAGATCAGTATGGTAAGTCAACGCTTGAAGA    200

BSNT_00126___    201 TATGATCAATGTCCGAGTTGTTGAGCAGCTGGCTAAAAAGAACAACCTTA    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU00720___ya    201 TATGATCAATGTCCGAGTTGTTGAGCAGCTGGCTAAAAAGAACAAACTTA    250

BSNT_00126___    251 AAATATCCAAAAGCGAAGTTGATCGTGAGTTTTTGCTGATTAAAGCGGTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00720___ya    251 AAATATCCAAAAGCGAAGTTGATCGTGAGTTTTTGCTGATTAAAGCGGTC    300

BSNT_00126___    301 AATAATTCCTTTTACGAAGATGAACATACGACGGAGAAAGAGTGGAAAGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00720___ya    301 AATAATTCCTTTTACGAAGATGAACATACGACGGAGAAAGAGTGGAAAGA    350

BSNT_00126___    351 CCAAATTCGTTATAATATCCTCCTTGAGGAATTGTTAACAAGGGATATCG    400
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU00720___ya    351 CCAAATTCGTTATAATATCCTCCTTGAGGATTTGTTAACAAGGGATATCG    400

BSNT_00126___    401 ATATCTCAAACAAAGAATTGGAATCATTCTATAATAAAAATAAGGAACTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00720___ya    401 ATATCTCAAACAAAGAATTGGAATCATTCTATAATAAAAATAAGGAACTA    450

BSNT_00126___    451 TATCAGTTTGATGATTCGTATCGAATTCGGCACATTGTTGTAAAGGATGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU00720___ya    451 TATCAGTTTGATGATTCGTATCGAATTCGGCACATTGTTGTAAAAGATGA    500

BSNT_00126___    501 AGAAGAAGCGAGAGAAGTCCTGAAAGAACTGAAAGGCGGATCAAGCTTTG    550
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU00720___ya    501 AGAAGAAGCAAGAGAAGTCCTGAAAGAACTGAAAGGCGGATCAAGCTTTG    550

BSNT_00126___    551 AAGCTGTCGCTGCCGAAAGATCCACTGACAGATATACATCACCATACGGC    600
                     ||||||||||||||||||||||.||.||||||||||||||||||||||||
BSU00720___ya    551 AAGCTGTCGCTGCCGAAAGATCTACAGACAGATATACATCACCATACGGC    600

BSNT_00126___    601 GGAGATTTAGGTTTTGTCACAGAGGCATCAGACAACATTCCATCAGCATA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00720___ya    601 GGAGATTTAGGTTTTGTCACAGAGGCATCAGACAACATTCCATCAGCATA    650

BSNT_00126___    651 CATTGAAGAGGCGAAAACACTCAAAGAGGATGAATGGTCTCAGGAACCAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00720___ya    651 CATTGAAGAGGCGAAAACACTCAAAGAGGATGAATGGTCTCAGGAACCAA    700

BSNT_00126___    701 TAAAGGTCAACAACGGATATGCCATTATCCAGCTGAAAGAAAAACTAAAG    750
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU00720___ya    701 TAAAGGTCAGCAACGGATATGCCATTATCCAGCTGAAAGAAAAACTAAAG    750

BSNT_00126___    751 GCAAGAACGTTCTCATTTGATGAAGTAAAGGACCAGATCAGACGGCAAAT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00720___ya    751 GCAAGAACGTTCTCATTTGATGAAGTAAAGGACCAGATCAGACGGCAAAT    800

BSNT_00126___    801 CGCAATGGATCAGCTAGGCGATAAAGCGACAGTTAAGACACTTTGGAAAG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00720___ya    801 CGCAATGGATCAGCTAGGCGATAAAGCGACAGTTAAGACACTTTGGAAAG    850

BSNT_00126___    851 AAGCCGATGTATCTTGGTTTTATGGGGAAAAAAGTACTAAGTGA    894
                     ||||||||||||||||||||||||||||||||||||||||||||
BSU00720___ya    851 AAGCCGATGTATCTTGGTTTTATGGGGAAAAAAGTACTAAGTGA    894


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