Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00115 and BSU00640
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:01
# Commandline: needle
# -asequence dna-align/BSNT_00115___spoIIE.1.22522.seq
# -bsequence dna-align/BSU00640___spoIIE.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00115___spoIIE-BSU00640___spoIIE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00115___spoIIE-BSU00640___spoIIE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00115___spoIIE
# 2: BSU00640___spoIIE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2493
# Identity: 2480/2493 (99.5%)
# Similarity: 2480/2493 (99.5%)
# Gaps: 9/2493 ( 0.4%)
# Score: 12384.0
#
#
#=======================================
BSNT_00115___ 1 ATGAGAGGAATGGAAAAAGCAGAAAGAAGAGTGAACGGGCCAATGGCGGG 50
|||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1 ---------ATGGAAAAAGCAGAAAGAAGAGTGAACGGGCCAATGGCGGG 41
BSNT_00115___ 51 ACAAGCTTTGGAAAAACTCCAATCGTTTTTTAACAGGGGCACGAAGCTGG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 42 ACAAGCTTTGGAAAAACTCCAATCGTTTTTTAACAGGGGCACGAAGCTGG 91
BSNT_00115___ 101 TGACTCATCATTTGCATTCACTGTTTTTCTATAAAGGATTCATTTATGTT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 92 TGACTCATCATTTGCATTCACTGTTTTTCTATAAAGGATTCATTTATGTT 141
BSNT_00115___ 151 GTCATCGGATTTTTGCTTGGACGGGCTTTCATATTATCCGAGGTGCTTCC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 142 GTCATCGGATTTTTGCTTGGACGGGCTTTCATATTATCCGAGGTGCTTCC 191
BSNT_00115___ 201 TTTCGCACTTCCTTTCTTTGGAGCGATGCTTCTAATCAGAAGAGACAAAG 250
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU00640___sp 192 TTTCGCACTTCCTTTCTTTGGAGCGATGCTTCTTATCAGAAGAGACAAAG 241
BSNT_00115___ 251 CGTTTTATGCGGTTTTGGCTGTGCTTGCAGGTGCGCTGACCATATCTCCA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 242 CGTTTTATGCGGTTTTGGCTGTGCTTGCAGGTGCGCTGACCATATCTCCA 291
BSNT_00115___ 301 AAGCACTCATTGCTCATACTGGCGGCATTGCTGGCATTCTTCGTATTTTC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 292 AAGCACTCATTGCTCATACTGGCGGCATTGCTGGCATTCTTCGTATTTTC 341
BSNT_00115___ 351 TAAAGTGGCTGCCTTCATTACCGACGATCGTGTTAAAGCGCTCCCGATTG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 342 TAAAGTGGCTGCCTTCATTACCGACGATCGTGTTAAAGCGCTCCCGATTG 391
BSNT_00115___ 401 TCGTGTTCTTCTCCATGGCTGCAGCAAGAGCCGGGTTTGTTTATGCCCAA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 392 TCGTGTTCTTCTCCATGGCTGCAGCAAGAGCCGGGTTTGTTTATGCCCAA 441
BSNT_00115___ 451 AATGGCGTATTTACAACCTATGATTATGTAATGGCTATCGTTGAGGCTGG 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 442 AATGGCGTATTTACAACCTATGATTATGTAATGGCTATCGTTGAGGCTGG 491
BSNT_00115___ 501 ACTATCGTTTATCTTAACACTGATTTTCCTTCAGAGCCTTCCGATTTTTA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 492 ACTATCGTTTATCTTAACACTGATTTTCCTTCAGAGCCTTCCGATTTTTA 541
BSNT_00115___ 551 CTGTGAAAAAAGTGAAACAATCATTAAAAATAGAGGAAATCATTTGCTTT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 542 CTGTGAAAAAAGTGAAACAATCATTAAAAATAGAGGAAATCATTTGCTTT 591
BSNT_00115___ 601 ATGATTCTTATTGCCTCTGTTTTAACGGGGCTGGCTGGCTTGTCCTACCA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 592 ATGATTCTTATTGCCTCTGTTTTAACGGGGCTGGCTGGCTTGTCCTACCA 641
BSNT_00115___ 651 AGGGATGCAGGCAGAACATATATTGGCTCGTTATGTTGTGTTGAGTTTTT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 642 AGGGATGCAGGCAGAACATATATTGGCTCGTTATGTTGTGTTGAGTTTTT 691
BSNT_00115___ 701 CCTTTATTGGCGGAGCAAGCATCGGCTGTACGGTTGGGGTTGTGACCGGC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 692 CCTTTATTGGCGGAGCAAGCATCGGCTGTACGGTTGGGGTTGTGACCGGC 741
BSNT_00115___ 751 CTGATTCTTGGCTTGGCGAATATCGGAAACCTATATCAAATGAGTCTGCT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 742 CTGATTCTTGGCTTGGCGAATATCGGAAACCTATATCAAATGAGTCTGCT 791
BSNT_00115___ 801 TGCTTTTTCCGGTTTATTGGGCGGTTTGCTGAAGGAAGGGAAAAAAGCGG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 792 TGCTTTTTCCGGTTTATTGGGCGGTTTGCTGAAGGAAGGGAAAAAAGCGG 841
BSNT_00115___ 851 GTGCAGCAATTGGTTTGATCGTTGGATCACTTCTTATATCTTTATATGGT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 842 GTGCAGCAATTGGTTTGATCGTTGGATCACTTCTTATATCTTTATATGGT 891
BSNT_00115___ 901 GAAGGCTCTGCCGGTCTGATGACAACGCTCTATGAGTCATTAATCGCAGT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 892 GAAGGCTCTGCCGGTCTGATGACAACGCTCTATGAGTCATTAATCGCAGT 941
BSNT_00115___ 951 CGGCCTGTTTTTGCTCACACCTCAATCTATTACGAGGAAAGTGGCGAGAT 1000
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 942 CTGCCTGTTTTTGCTCACACCTCAATCTATTACGAGGAAAGTGGCGAGAT 991
BSNT_00115___ 1001 ATATTCCGGGAACTGTCGAGCATCTTCAAGAGCAACAGCAATACGCTAGA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 992 ATATTCCGGGAACTGTCGAGCATCTTCAAGAGCAACAGCAATACGCTAGA 1041
BSNT_00115___ 1051 AAAATCCGTGATGTCACTGCTCAGAAGGTAGACCAATTCTCCAATGTATT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1042 AAAATCCGTGATGTCACTGCTCAGAAGGTAGACCAATTCTCCAATGTATT 1091
BSNT_00115___ 1101 TCACGCGCTGTCTGAAAGCTTTGCAACCTTTTATCAAGCATCAGACGAAC 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1092 TCACGCGCTGTCTGAAAGCTTTGCAACCTTTTATCAAGCATCAGACGAAC 1141
BSNT_00115___ 1151 AGACAGATGACAGCGAAGTTGATCTGTTCTTAAGCAAAATCACGGAGCAT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1142 AGACAGATGACAGCGAAGTTGATCTGTTCTTAAGCAAAATCACGGAGCAT 1191
BSNT_00115___ 1201 TCCTGCCAGACGTGCTACAAGAAAAACAGGTGCTGGGTACAGAACTTTGA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1192 TCCTGCCAGACGTGCTACAAGAAAAACAGGTGCTGGGTACAGAACTTTGA 1241
BSNT_00115___ 1251 TAAAACATATGACTTAATGAAACAAGTTATGCTTGAAACAGAGGAAAAAG 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1242 TAAAACATATGACTTAATGAAACAAGTTATGCTTGAAACAGAGGAAAAAG 1291
BSNT_00115___ 1301 AATATGCATCAAACCGAAGGCTGAAAAAAGAGTTTCAACAGTATTGTTCT 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1292 AATATGCATCAAACCGAAGGCTGAAAAAAGAGTTTCAACAGTATTGTTCT 1341
BSNT_00115___ 1351 AAATCCAAGCAGGTTGAAGAGCTGATTGAGGATGAGCTCGCACATCATCA 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1342 AAATCCAAGCAGGTTGAAGAGCTGATTGAGGATGAGCTCGCACATCATCA 1391
BSNT_00115___ 1401 TGCCCATTTGACACTCAAGAAAAAAGTCCAAGACAGCAGGCGCCTTGTTG 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1392 TGCCCATTTGACACTCAAGAAAAAAGTCCAAGACAGCAGGCGCCTTGTTG 1441
BSNT_00115___ 1451 CTGAACAGCTTTTAGGCGTTTCTGAGGTTATGGCCGACTTTTCTCGGGAA 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1442 CTGAACAGCTTTTAGGCGTTTCTGAGGTTATGGCCGACTTTTCTCGGGAA 1491
BSNT_00115___ 1501 ATAAAAAGAGAGCGAGAACAGCACTTTCTGCAGGAAGAGCAAATCATAGA 1550
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU00640___sp 1492 ATAAAAAGAGAGCGAGAACAACACTTTCTGCAGGAAGAGCAAATCATAGA 1541
BSNT_00115___ 1551 AGCGCTTCAGCATTTCGGAATTGAGATTCAGCATGTCGAGATCTATAGTC 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1542 AGCGCTTCAGCATTTCGGAATTGAGATTCAGCATGTCGAGATCTATAGTC 1591
BSNT_00115___ 1601 TTGAACAAGGAAATATCGATATTGAAATGACCATTCCGTTCAGCGGACAT 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1592 TTGAACAAGGAAATATCGATATTGAAATGACCATTCCGTTCAGCGGACAT 1641
BSNT_00115___ 1651 GGAGAAAGTGAAAAAATCATTGCTCCTATGCTTTCTGACATTCTGGAGGA 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1642 GGAGAAAGTGAAAAAATCATTGCTCCTATGCTTTCTGACATTCTGGAGGA 1691
BSNT_00115___ 1701 ACAAATTCTTGTGAAAGCCGAACAGCACTCTCCGCATCCGAATGGATACA 1750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1692 ACAAATTCTTGTGAAAGCCGAACAGCACTCTCCGCATCCGAATGGATACA 1741
BSNT_00115___ 1751 GCCATGTCGCCTTTGGATCAACAAAATCATACAGGGTGTCCACGGGAGCT 1800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1742 GCCATGTCGCCTTTGGATCAACAAAATCATACAGGGTGTCCACGGGAGCT 1791
BSNT_00115___ 1801 GCTCACGCTGCGAAGGGCGGCGGCCTTGTCTCCGGTGACAGCTACAGCAT 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1792 GCTCACGCTGCGAAGGGCGGCGGCCTTGTCTCCGGTGACAGCTACAGCAT 1841
BSNT_00115___ 1851 GATGGAGCTTGGAGCCAGAAAATATGCTGCAGCAATCAGTGACGGAATGG 1900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1842 GATGGAGCTTGGAGCCAGAAAATATGCTGCAGCAATCAGTGACGGAATGG 1891
BSNT_00115___ 1901 GCAATGGCGCAAGAGCGCACTTTGAAAGCAATGAAACGATCAAGCTTCTT 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1892 GCAATGGCGCAAGAGCGCACTTTGAAAGCAATGAAACGATCAAGCTTCTT 1941
BSNT_00115___ 1951 GAAAAAATCCTTGAATCGGGCATTGATGAAAAAATAGCAATTAAAACGAT 2000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1942 GAAAAAATCCTTGAATCGGGCATTGATGAAAAAATAGCAATTAAAACGAT 1991
BSNT_00115___ 2001 CAACAGCATACTGTCTCTAAGGACAACTGACGAAATATATTCCACGCTTG 2050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 1992 CAACAGCATACTGTCTCTAAGGACAACTGACGAAATATATTCCACGCTTG 2041
BSNT_00115___ 2051 ACCTATCTATTATCGATCTTCAAGATGCCAGCTGTAAATTTTTGAAGGTT 2100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 2042 ACCTATCTATTATCGATCTTCAAGATGCCAGCTGTAAATTTTTGAAGGTT 2091
BSNT_00115___ 2101 GGATCGACGCCCAGCTTTATCAAACGGGGTGACCAGGTCATGAAAGTTCA 2150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 2092 GGATCGACGCCCAGCTTTATCAAACGGGGTGACCAGGTCATGAAAGTTCA 2141
BSNT_00115___ 2151 AGCGAGCAATCTGCCAATCGGTATTATTAATGAATTCGATGTGGAGGTTG 2200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 2142 AGCGAGCAATCTGCCAATCGGTATTATTAATGAATTCGATGTGGAGGTTG 2191
BSNT_00115___ 2201 TGAGTGAACAGCTGAAAGCGGGTGACCTCTTAATTATGATGAGTGATGGC 2250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 2192 TGAGTGAACAGCTGAAAGCGGGTGACCTCTTAATTATGATGAGTGATGGC 2241
BSNT_00115___ 2251 ATTTTTGAGGGGCCTAAGCATGTGGAAAATCACGACTTATGGATGAAACG 2300
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU00640___sp 2242 ATTTTTGAGGGGCCTAAGCATGTGGAAAATCACGACTTATGGATGAAGCG 2291
BSNT_00115___ 2301 TAAAATGAAAGGGTTGAAAACAAATGACCCGCAGGAGATTGCCGATTTGC 2350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 2292 TAAAATGAAAGGGTTGAAAACAAATGACCCGCAGGAGATTGCCGATTTGC 2341
BSNT_00115___ 2351 TTATGGAAGAAGTCATCCGCACAAGATCCGGCCAAATTGAGGACGATATG 2400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 2342 TTATGGAAGAAGTCATCCGCACAAGATCCGGCCAAATTGAGGACGATATG 2391
BSNT_00115___ 2401 ACTGTTGTTGTCGTCCGGATTGATCACAATACACCGAAGTGGGCATCCAT 2450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 2392 ACTGTTGTTGTCGTCCGGATTGATCACAATACACCGAAGTGGGCATCCAT 2441
BSNT_00115___ 2451 TCCTGTTCCGGCAATCTTTCAAAACAAACAAGAAATTTCATAA 2493
|||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp 2442 TCCTGTTCCGGCAATCTTTCAAAACAAACAAGAAATTTCATAA 2484
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