Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00115 and BSU00640

See Amino acid alignment / Visit BSNT_00115 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:01
# Commandline: needle
#    -asequence dna-align/BSNT_00115___spoIIE.1.22522.seq
#    -bsequence dna-align/BSU00640___spoIIE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00115___spoIIE-BSU00640___spoIIE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00115___spoIIE-BSU00640___spoIIE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00115___spoIIE
# 2: BSU00640___spoIIE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2493
# Identity:    2480/2493 (99.5%)
# Similarity:  2480/2493 (99.5%)
# Gaps:           9/2493 ( 0.4%)
# Score: 12384.0
# 
#
#=======================================

BSNT_00115___      1 ATGAGAGGAATGGAAAAAGCAGAAAGAAGAGTGAACGGGCCAATGGCGGG     50
                              |||||||||||||||||||||||||||||||||||||||||
BSU00640___sp      1 ---------ATGGAAAAAGCAGAAAGAAGAGTGAACGGGCCAATGGCGGG     41

BSNT_00115___     51 ACAAGCTTTGGAAAAACTCCAATCGTTTTTTAACAGGGGCACGAAGCTGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp     42 ACAAGCTTTGGAAAAACTCCAATCGTTTTTTAACAGGGGCACGAAGCTGG     91

BSNT_00115___    101 TGACTCATCATTTGCATTCACTGTTTTTCTATAAAGGATTCATTTATGTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp     92 TGACTCATCATTTGCATTCACTGTTTTTCTATAAAGGATTCATTTATGTT    141

BSNT_00115___    151 GTCATCGGATTTTTGCTTGGACGGGCTTTCATATTATCCGAGGTGCTTCC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    142 GTCATCGGATTTTTGCTTGGACGGGCTTTCATATTATCCGAGGTGCTTCC    191

BSNT_00115___    201 TTTCGCACTTCCTTTCTTTGGAGCGATGCTTCTAATCAGAAGAGACAAAG    250
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU00640___sp    192 TTTCGCACTTCCTTTCTTTGGAGCGATGCTTCTTATCAGAAGAGACAAAG    241

BSNT_00115___    251 CGTTTTATGCGGTTTTGGCTGTGCTTGCAGGTGCGCTGACCATATCTCCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    242 CGTTTTATGCGGTTTTGGCTGTGCTTGCAGGTGCGCTGACCATATCTCCA    291

BSNT_00115___    301 AAGCACTCATTGCTCATACTGGCGGCATTGCTGGCATTCTTCGTATTTTC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    292 AAGCACTCATTGCTCATACTGGCGGCATTGCTGGCATTCTTCGTATTTTC    341

BSNT_00115___    351 TAAAGTGGCTGCCTTCATTACCGACGATCGTGTTAAAGCGCTCCCGATTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    342 TAAAGTGGCTGCCTTCATTACCGACGATCGTGTTAAAGCGCTCCCGATTG    391

BSNT_00115___    401 TCGTGTTCTTCTCCATGGCTGCAGCAAGAGCCGGGTTTGTTTATGCCCAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    392 TCGTGTTCTTCTCCATGGCTGCAGCAAGAGCCGGGTTTGTTTATGCCCAA    441

BSNT_00115___    451 AATGGCGTATTTACAACCTATGATTATGTAATGGCTATCGTTGAGGCTGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    442 AATGGCGTATTTACAACCTATGATTATGTAATGGCTATCGTTGAGGCTGG    491

BSNT_00115___    501 ACTATCGTTTATCTTAACACTGATTTTCCTTCAGAGCCTTCCGATTTTTA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    492 ACTATCGTTTATCTTAACACTGATTTTCCTTCAGAGCCTTCCGATTTTTA    541

BSNT_00115___    551 CTGTGAAAAAAGTGAAACAATCATTAAAAATAGAGGAAATCATTTGCTTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    542 CTGTGAAAAAAGTGAAACAATCATTAAAAATAGAGGAAATCATTTGCTTT    591

BSNT_00115___    601 ATGATTCTTATTGCCTCTGTTTTAACGGGGCTGGCTGGCTTGTCCTACCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    592 ATGATTCTTATTGCCTCTGTTTTAACGGGGCTGGCTGGCTTGTCCTACCA    641

BSNT_00115___    651 AGGGATGCAGGCAGAACATATATTGGCTCGTTATGTTGTGTTGAGTTTTT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    642 AGGGATGCAGGCAGAACATATATTGGCTCGTTATGTTGTGTTGAGTTTTT    691

BSNT_00115___    701 CCTTTATTGGCGGAGCAAGCATCGGCTGTACGGTTGGGGTTGTGACCGGC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    692 CCTTTATTGGCGGAGCAAGCATCGGCTGTACGGTTGGGGTTGTGACCGGC    741

BSNT_00115___    751 CTGATTCTTGGCTTGGCGAATATCGGAAACCTATATCAAATGAGTCTGCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    742 CTGATTCTTGGCTTGGCGAATATCGGAAACCTATATCAAATGAGTCTGCT    791

BSNT_00115___    801 TGCTTTTTCCGGTTTATTGGGCGGTTTGCTGAAGGAAGGGAAAAAAGCGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    792 TGCTTTTTCCGGTTTATTGGGCGGTTTGCTGAAGGAAGGGAAAAAAGCGG    841

BSNT_00115___    851 GTGCAGCAATTGGTTTGATCGTTGGATCACTTCTTATATCTTTATATGGT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    842 GTGCAGCAATTGGTTTGATCGTTGGATCACTTCTTATATCTTTATATGGT    891

BSNT_00115___    901 GAAGGCTCTGCCGGTCTGATGACAACGCTCTATGAGTCATTAATCGCAGT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    892 GAAGGCTCTGCCGGTCTGATGACAACGCTCTATGAGTCATTAATCGCAGT    941

BSNT_00115___    951 CGGCCTGTTTTTGCTCACACCTCAATCTATTACGAGGAAAGTGGCGAGAT   1000
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    942 CTGCCTGTTTTTGCTCACACCTCAATCTATTACGAGGAAAGTGGCGAGAT    991

BSNT_00115___   1001 ATATTCCGGGAACTGTCGAGCATCTTCAAGAGCAACAGCAATACGCTAGA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp    992 ATATTCCGGGAACTGTCGAGCATCTTCAAGAGCAACAGCAATACGCTAGA   1041

BSNT_00115___   1051 AAAATCCGTGATGTCACTGCTCAGAAGGTAGACCAATTCTCCAATGTATT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1042 AAAATCCGTGATGTCACTGCTCAGAAGGTAGACCAATTCTCCAATGTATT   1091

BSNT_00115___   1101 TCACGCGCTGTCTGAAAGCTTTGCAACCTTTTATCAAGCATCAGACGAAC   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1092 TCACGCGCTGTCTGAAAGCTTTGCAACCTTTTATCAAGCATCAGACGAAC   1141

BSNT_00115___   1151 AGACAGATGACAGCGAAGTTGATCTGTTCTTAAGCAAAATCACGGAGCAT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1142 AGACAGATGACAGCGAAGTTGATCTGTTCTTAAGCAAAATCACGGAGCAT   1191

BSNT_00115___   1201 TCCTGCCAGACGTGCTACAAGAAAAACAGGTGCTGGGTACAGAACTTTGA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1192 TCCTGCCAGACGTGCTACAAGAAAAACAGGTGCTGGGTACAGAACTTTGA   1241

BSNT_00115___   1251 TAAAACATATGACTTAATGAAACAAGTTATGCTTGAAACAGAGGAAAAAG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1242 TAAAACATATGACTTAATGAAACAAGTTATGCTTGAAACAGAGGAAAAAG   1291

BSNT_00115___   1301 AATATGCATCAAACCGAAGGCTGAAAAAAGAGTTTCAACAGTATTGTTCT   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1292 AATATGCATCAAACCGAAGGCTGAAAAAAGAGTTTCAACAGTATTGTTCT   1341

BSNT_00115___   1351 AAATCCAAGCAGGTTGAAGAGCTGATTGAGGATGAGCTCGCACATCATCA   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1342 AAATCCAAGCAGGTTGAAGAGCTGATTGAGGATGAGCTCGCACATCATCA   1391

BSNT_00115___   1401 TGCCCATTTGACACTCAAGAAAAAAGTCCAAGACAGCAGGCGCCTTGTTG   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1392 TGCCCATTTGACACTCAAGAAAAAAGTCCAAGACAGCAGGCGCCTTGTTG   1441

BSNT_00115___   1451 CTGAACAGCTTTTAGGCGTTTCTGAGGTTATGGCCGACTTTTCTCGGGAA   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1442 CTGAACAGCTTTTAGGCGTTTCTGAGGTTATGGCCGACTTTTCTCGGGAA   1491

BSNT_00115___   1501 ATAAAAAGAGAGCGAGAACAGCACTTTCTGCAGGAAGAGCAAATCATAGA   1550
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU00640___sp   1492 ATAAAAAGAGAGCGAGAACAACACTTTCTGCAGGAAGAGCAAATCATAGA   1541

BSNT_00115___   1551 AGCGCTTCAGCATTTCGGAATTGAGATTCAGCATGTCGAGATCTATAGTC   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1542 AGCGCTTCAGCATTTCGGAATTGAGATTCAGCATGTCGAGATCTATAGTC   1591

BSNT_00115___   1601 TTGAACAAGGAAATATCGATATTGAAATGACCATTCCGTTCAGCGGACAT   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1592 TTGAACAAGGAAATATCGATATTGAAATGACCATTCCGTTCAGCGGACAT   1641

BSNT_00115___   1651 GGAGAAAGTGAAAAAATCATTGCTCCTATGCTTTCTGACATTCTGGAGGA   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1642 GGAGAAAGTGAAAAAATCATTGCTCCTATGCTTTCTGACATTCTGGAGGA   1691

BSNT_00115___   1701 ACAAATTCTTGTGAAAGCCGAACAGCACTCTCCGCATCCGAATGGATACA   1750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1692 ACAAATTCTTGTGAAAGCCGAACAGCACTCTCCGCATCCGAATGGATACA   1741

BSNT_00115___   1751 GCCATGTCGCCTTTGGATCAACAAAATCATACAGGGTGTCCACGGGAGCT   1800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1742 GCCATGTCGCCTTTGGATCAACAAAATCATACAGGGTGTCCACGGGAGCT   1791

BSNT_00115___   1801 GCTCACGCTGCGAAGGGCGGCGGCCTTGTCTCCGGTGACAGCTACAGCAT   1850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1792 GCTCACGCTGCGAAGGGCGGCGGCCTTGTCTCCGGTGACAGCTACAGCAT   1841

BSNT_00115___   1851 GATGGAGCTTGGAGCCAGAAAATATGCTGCAGCAATCAGTGACGGAATGG   1900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1842 GATGGAGCTTGGAGCCAGAAAATATGCTGCAGCAATCAGTGACGGAATGG   1891

BSNT_00115___   1901 GCAATGGCGCAAGAGCGCACTTTGAAAGCAATGAAACGATCAAGCTTCTT   1950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1892 GCAATGGCGCAAGAGCGCACTTTGAAAGCAATGAAACGATCAAGCTTCTT   1941

BSNT_00115___   1951 GAAAAAATCCTTGAATCGGGCATTGATGAAAAAATAGCAATTAAAACGAT   2000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1942 GAAAAAATCCTTGAATCGGGCATTGATGAAAAAATAGCAATTAAAACGAT   1991

BSNT_00115___   2001 CAACAGCATACTGTCTCTAAGGACAACTGACGAAATATATTCCACGCTTG   2050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   1992 CAACAGCATACTGTCTCTAAGGACAACTGACGAAATATATTCCACGCTTG   2041

BSNT_00115___   2051 ACCTATCTATTATCGATCTTCAAGATGCCAGCTGTAAATTTTTGAAGGTT   2100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   2042 ACCTATCTATTATCGATCTTCAAGATGCCAGCTGTAAATTTTTGAAGGTT   2091

BSNT_00115___   2101 GGATCGACGCCCAGCTTTATCAAACGGGGTGACCAGGTCATGAAAGTTCA   2150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   2092 GGATCGACGCCCAGCTTTATCAAACGGGGTGACCAGGTCATGAAAGTTCA   2141

BSNT_00115___   2151 AGCGAGCAATCTGCCAATCGGTATTATTAATGAATTCGATGTGGAGGTTG   2200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   2142 AGCGAGCAATCTGCCAATCGGTATTATTAATGAATTCGATGTGGAGGTTG   2191

BSNT_00115___   2201 TGAGTGAACAGCTGAAAGCGGGTGACCTCTTAATTATGATGAGTGATGGC   2250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   2192 TGAGTGAACAGCTGAAAGCGGGTGACCTCTTAATTATGATGAGTGATGGC   2241

BSNT_00115___   2251 ATTTTTGAGGGGCCTAAGCATGTGGAAAATCACGACTTATGGATGAAACG   2300
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU00640___sp   2242 ATTTTTGAGGGGCCTAAGCATGTGGAAAATCACGACTTATGGATGAAGCG   2291

BSNT_00115___   2301 TAAAATGAAAGGGTTGAAAACAAATGACCCGCAGGAGATTGCCGATTTGC   2350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   2292 TAAAATGAAAGGGTTGAAAACAAATGACCCGCAGGAGATTGCCGATTTGC   2341

BSNT_00115___   2351 TTATGGAAGAAGTCATCCGCACAAGATCCGGCCAAATTGAGGACGATATG   2400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   2342 TTATGGAAGAAGTCATCCGCACAAGATCCGGCCAAATTGAGGACGATATG   2391

BSNT_00115___   2401 ACTGTTGTTGTCGTCCGGATTGATCACAATACACCGAAGTGGGCATCCAT   2450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   2392 ACTGTTGTTGTCGTCCGGATTGATCACAATACACCGAAGTGGGCATCCAT   2441

BSNT_00115___   2451 TCCTGTTCCGGCAATCTTTCAAAACAAACAAGAAATTTCATAA   2493
                     |||||||||||||||||||||||||||||||||||||||||||
BSU00640___sp   2442 TCCTGTTCCGGCAATCTTTCAAAACAAACAAGAAATTTCATAA   2484


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