Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_00098 and BSU00590

See Amino acid alignment / Visit BSNT_00098 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:00
# Commandline: needle
#    -asequence dna-align/BSNT_00098___yabO.1.22522.seq
#    -bsequence dna-align/BSU00590___yabO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00098___yabO-BSU00590___yabO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00098___yabO-BSU00590___yabO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00098___yabO
# 2: BSU00590___yabO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     260/261 (99.6%)
# Similarity:   260/261 (99.6%)
# Gaps:           0/261 ( 0.0%)
# Score: 1296.0
# 
#
#=======================================

BSNT_00098___      1 ATGAGATTAGATAAATTTTTGAAGGTATCACGGCTGATCAAACGGCGTAC     50
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU00590___ya      1 ATGAGATTAGATAAATTTTTGAAAGTATCACGGCTGATCAAACGGCGTAC     50

BSNT_00098___     51 ACTAGCGAAGGAAGTAGCTGACCAAGGACGAATCTCTATTAACGGAAACC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00590___ya     51 ACTAGCGAAGGAAGTAGCTGACCAAGGACGAATCTCTATTAACGGAAACC    100

BSNT_00098___    101 AAGCTAAAGCTAGCTCTGACGTAAAACCGGGAGATGAACTAACGGTCCGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00590___ya    101 AAGCTAAAGCTAGCTCTGACGTAAAACCGGGAGATGAACTAACGGTCCGC    150

BSNT_00098___    151 TTCGGCCAAAAGCTTGTAACGGTTCAAGTTAATGAATTGAAAGACACGAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00590___ya    151 TTCGGCCAAAAGCTTGTAACGGTTCAAGTTAATGAATTGAAAGACACGAC    200

BSNT_00098___    201 GAAAAAAGAAGAAGCTGCAAACATGTACACGATTCTAAAAGAAGAAAAAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00590___ya    201 GAAAAAAGAAGAAGCTGCAAACATGTACACGATTCTAAAAGAAGAAAAAC    250

BSNT_00098___    251 TCGGCGAATAG    261
                     |||||||||||
BSU00590___ya    251 TCGGCGAATAG    261


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.