Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00080 and BSU00440

See Amino acid alignment / Visit BSNT_00080 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:56
# Commandline: needle
#    -asequence dna-align/BSNT_00080___veg.1.22522.seq
#    -bsequence dna-align/BSU00440___veg.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00080___veg-BSU00440___veg.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00080___veg-BSU00440___veg.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00080___veg
# 2: BSU00440___veg
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     261/261 (100.0%)
# Similarity:   261/261 (100.0%)
# Gaps:           0/261 ( 0.0%)
# Score: 1305.0
# 
#
#=======================================

BSNT_00080___      1 ATGGCGAAGACGTTGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00440___ve      1 ATGGCGAAGACGTTGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGG     50

BSNT_00080___     51 TAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00440___ve     51 TAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGC    100

BSNT_00080___    101 GTTCGGGCATTTTAGCTGAGACGTACCCTTCTGTTTTTGTGATACAACTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00440___ve    101 GTTCGGGCATTTTAGCTGAGACGTACCCTTCTGTTTTTGTGATACAACTA    150

BSNT_00080___    151 GATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00440___ve    151 GATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATAT    200

BSNT_00080___    201 TTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAGCTCAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00440___ve    201 TTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAGCTCAG    250

BSNT_00080___    251 TGGCATTTTAA    261
                     |||||||||||
BSU00440___ve    251 TGGCATTTTAA    261


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