Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00073 and BSU00390

See Amino acid alignment / Visit BSNT_00073 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:55
# Commandline: needle
#    -asequence dna-align/BSNT_00073___yabD.1.22522.seq
#    -bsequence dna-align/BSU00390___yabD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00073___yabD-BSU00390___yabD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00073___yabD-BSU00390___yabD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00073___yabD
# 2: BSU00390___yabD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 768
# Identity:     760/768 (99.0%)
# Similarity:   760/768 (99.0%)
# Gaps:           0/768 ( 0.0%)
# Score: 3768.0
# 
#
#=======================================

BSNT_00073___      1 ATGTTGTTTGACACTCACGCGCATTTAAATGCAGAACAATATGATACTGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00390___ya      1 ATGTTGTTTGACACTCACGCGCATTTAAATGCAGAACAATATGATACTGA     50

BSNT_00073___     51 TCTGGATGAGGTTATTGAACGGGCAAAAGCTGAAAAAGTTGAACGAATTG    100
                     |||.||.|||||||||||||||||||||||||||||||||||||||||||
BSU00390___ya     51 TCTTGAAGAGGTTATTGAACGGGCAAAAGCTGAAAAAGTTGAACGAATTG    100

BSNT_00073___    101 TCGTAGTTGGTTTTGACCGTCCGACGATTACCCGTGCGATGGAAATGATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00390___ya    101 TCGTAGTTGGTTTTGACCGTCCGACGATTACCCGTGCGATGGAAATGATT    150

BSNT_00073___    151 GAGGAATATGATTTTATTTATGCAGCCATTGGCTGGCACCCTGTTGACGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00390___ya    151 GAGGAATATGATTTTATTTATGCAGCCATTGGCTGGCACCCTGTTGACGC    200

BSNT_00073___    201 TATTGACATGACAGAGGAAGACTTAGCGTGGATTAAAGAGCTTTCTGCTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00390___ya    201 TATTGACATGACAGAGGAAGACTTAGCGTGGATTAAAGAGCTTTCTGCTC    250

BSNT_00073___    251 ATGAGAAAGTGGTAGCGATAGGGGAAATGGGACTGGATTATCATTGGGAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00390___ya    251 ATGAGAAAGTGGTAGCGATAGGGGAAATGGGACTGGATTATCATTGGGAT    300

BSNT_00073___    301 AAATCACCTAAAGATATTCAAAAAGAGGTGTTTAGAAAACAAATCGCCTT    350
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU00390___ya    301 AAATCACCTAAAGATATTCAAAAAGAGGTGTTTAGAAATCAAATCGCCTT    350

BSNT_00073___    351 AGCGAAAGAGGTCAATTTGCCTATTATCATTCATAACCGTGATGCAACGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00390___ya    351 AGCGAAAGAGGTCAATTTGCCTATTATCATTCATAACCGTGATGCAACGG    400

BSNT_00073___    401 AGGATGTCGTGACCATTTTAAAAGAGGAAGGCGCAGAAGCTGTGGGCGGA    450
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU00390___ya    401 AGGATGTCGTGACCATTTTGAAAGAGGAAGGCGCAGAAGCTGTGGGCGGA    450

BSNT_00073___    451 ATCATGCACTGCTTTACAGGAAGTGCGGAAGTGGCAAGAGAATGCATGAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00390___ya    451 ATCATGCACTGCTTTACAGGAAGTGCGGAAGTGGCAAGAGAATGCATGAA    500

BSNT_00073___    501 AATGAATTTTTATTTGTCATTTGGAGGACCGGTGACATTTAAAAATGCGA    550
                     |||||||||||||||.||||||||.|||||||||||||||||||||||||
BSU00390___ya    501 AATGAATTTTTATTTATCATTTGGGGGACCGGTGACATTTAAAAATGCGA    550

BSNT_00073___    551 AGAAACCGAAGGAAGTAGTGAAGGAAATTCCCAATGACCGGCTGCTGATT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00390___ya    551 AGAAACCGAAGGAAGTAGTGAAGGAAATTCCCAATGACCGGCTGCTGATT    600

BSNT_00073___    601 GAAACGGACTGCCCGTTTCTCACACCGCACCCTTTCCGCGGGAAAAGAAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00390___ya    601 GAAACGGACTGCCCGTTTCTCACACCGCACCCTTTCCGCGGGAAAAGAAA    650

BSNT_00073___    651 TGAGCCAAGCTATGTGAAATATGTGGCAGAACAAATCGCCGAATTAAAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00390___ya    651 TGAGCCAAGCTATGTGAAATATGTGGCAGAACAAATCGCCGAATTAAAAG    700

BSNT_00073___    701 AAATGACCTTTGAAGAGATTGCGTCAATCACGACTGAAAATGCGAAAAGA    750
                     ||||||||||||||||||||||.||.||||||||||||||||||||||||
BSU00390___ya    701 AAATGACCTTTGAAGAGATTGCTTCCATCACGACTGAAAATGCGAAAAGA    750

BSNT_00073___    751 CTTTTCCGTATAAACTGA    768
                     ||||||||||||||||||
BSU00390___ya    751 CTTTTCCGTATAAACTGA    768


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