Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00065 and BSU00320

See Amino acid alignment / Visit BSNT_00065 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:54
# Commandline: needle
#    -asequence dna-align/BSNT_00065___yaaT.1.22522.seq
#    -bsequence dna-align/BSU00320___yaaT.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00065___yaaT-BSU00320___yaaT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00065___yaaT-BSU00320___yaaT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00065___yaaT
# 2: BSU00320___yaaT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 828
# Identity:     826/828 (99.8%)
# Similarity:   826/828 (99.8%)
# Gaps:           0/828 ( 0.0%)
# Score: 4122.0
# 
#
#=======================================

BSNT_00065___      1 TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya      1 TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTA     50

BSNT_00065___     51 TTTTGATCCGAATGGATTTCATATAGAACATGACAGCTGCGTAATTGTAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya     51 TTTTGATCCGAATGGATTTCATATAGAACATGACAGCTGCGTAATTGTAG    100

BSNT_00065___    101 AAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya    101 AAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAG    150

BSNT_00065___    151 GTGGATGAGCATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya    151 GTGGATGAGCATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGC    200

BSNT_00065___    201 TGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAGGAAGCACTAT    250
                     .|||||.|||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya    201 AGACGATCGCGATCTTCTCATTGTAGAAGAAAATAAACAGGAAGCACTAT    250

BSNT_00065___    251 CAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya    251 CAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATG    300

BSNT_00065___    301 AAGCTGGTCGATGTTGAATTCACGTTTGATCGCAATAAAGTCATTTTTTA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya    301 AAGCTGGTCGATGTTGAATTCACGTTTGATCGCAATAAAGTCATTTTTTA    350

BSNT_00065___    351 CTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya    351 CTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG    400

BSNT_00065___    401 CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya    401 CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGAT    450

BSNT_00065___    451 GAGGCAAAAATGCTCGGAGGAATCGGTCCTTGCGGAAGAATGCTTTGCTG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya    451 GAGGCAAAAATGCTCGGAGGAATCGGTCCTTGCGGAAGAATGCTTTGCTG    500

BSNT_00065___    501 TTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya    501 TTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGG    550

BSNT_00065___    551 ATCAGAACTTGTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya    551 ATCAGAACTTGTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGA    600

BSNT_00065___    601 TTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGACGGCAAAAGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya    601 TTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGACGGCAAAAGA    650

BSNT_00065___    651 ACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya    651 ACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGA    700

BSNT_00065___    701 AGGTCGTCGGACTAAATATTCTGGAACGGGTGCTTCAGGTGGAACTGATA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya    701 AGGTCGTCGGACTAAATATTCTGGAACGGGTGCTTCAGGTGGAACTGATA    750

BSNT_00065___    751 AACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00320___ya    751 AACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG    800

BSNT_00065___    801 CGTCGTATCCGCACAAACCACAGATTAA    828
                     ||||||||||||||||||||||||||||
BSU00320___ya    801 CGTCGTATCCGCACAAACCACAGATTAA    828


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