Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_00063 and BSU00310

See Amino acid alignment / Visit BSNT_00063 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:54
# Commandline: needle
#    -asequence dna-align/BSNT_00063___holB.1.22522.seq
#    -bsequence dna-align/BSU00310___holB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00063___holB-BSU00310___holB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00063___holB-BSU00310___holB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00063___holB
# 2: BSU00310___holB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 990
# Identity:     984/990 (99.4%)
# Similarity:   984/990 (99.4%)
# Gaps:           0/990 ( 0.0%)
# Score: 4896.0
# 
#
#=======================================

BSNT_00063___      1 ATGGCAATATCTTGGAAGGAAATGAACGAGCTTCAGCCCAGAGTGATGAA     50
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU00310___ho      1 ATGGCAATATCCTGGAAGGAAATGAACGAGCTTCAGCCCAGAGTGATGAA     50

BSNT_00063___     51 GCTTTTATATAATAGTATTGAGAAGGACAGACTATCACACGCTTATTTGT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00310___ho     51 GCTTTTATATAATAGTATTGAGAAGGACAGACTATCACACGCTTATTTGT    100

BSNT_00063___    101 TTGAGGGAAAAAAAGGAACAGGCAAGCTTGATGCCGCGCTGCTTCTTGCA    150
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU00310___ho    101 TTGAGGGGAAAAAAGGAACAGGCAAGCTTGATGCCGCGCTGCTTCTTGCA    150

BSNT_00063___    151 AAAAGCTTCTTTTGTCTGGAGGATGGCGCGGAGCCTTGTGAGAGCTGCCG    200
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU00310___ho    151 AAAAGCTTCTTTTGTCTGGAGGGTGGCGCGGAGCCTTGTGAGAGCTGCCG    200

BSNT_00063___    201 AAACTGTAAACGGATAGAGTCAGGGAACCATCCTGATCTCCATCTTGTTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00310___ho    201 AAACTGTAAACGGATAGAGTCAGGGAACCATCCTGATCTCCATCTTGTTC    250

BSNT_00063___    251 AGCCTGATGGCTTATCAATCAAAAAGGCGCAAATTCAAGCGCTCCAAGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00310___ho    251 AGCCTGATGGCTTATCAATCAAAAAGGCGCAAATTCAAGCGCTCCAAGAA    300

BSNT_00063___    301 GAGTTTTCTAAGACAGGACTTGAATCGCATAAAAAGCTGTATATTATTTC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00310___ho    301 GAGTTTTCTAAGACAGGACTTGAATCGCATAAAAAGCTGTATATTATTTC    350

BSNT_00063___    351 GCACGCAGATCAAATGACAGCAAATGCGGCGAACAGCCTGCTGAAATTTT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00310___ho    351 GCACGCAGATCAAATGACAGCAAATGCGGCGAACAGCCTGCTGAAATTTT    400

BSNT_00063___    401 TAGAAGAACCGAACAAAGACACAATGGCCGTCCTCATCACTGAGCAGCCC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00310___ho    401 TAGAAGAACCGAACAAAGACACAATGGCCGTCCTCATCACTGAGCAGCCC    450

BSNT_00063___    451 CAAAGGTTATTGGATACCATCATTTCAAGATGCCAAACCCTTCCTTTTCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00310___ho    451 CAAAGGTTATTGGATACCATCATTTCAAGATGCCAAACCCTTCCTTTTCA    500

BSNT_00063___    501 GCCTTTGCAACCGAAAGCAATTGAAGATAGACTGATCGAACAGGACGTCT    550
                     |||||||||.|||||||||||||||||.||||||||||||||||||||||
BSU00310___ho    501 GCCTTTGCAGCCGAAAGCAATTGAAGACAGACTGATCGAACAGGACGTCT    550

BSNT_00063___    551 CGCCTCATATGGCAAGGCTTCTGGCCAACATGACCAATAATGTAGCAGAA    600
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU00310___ho    551 CGCCTCATATGGCAAGGCTTCTGGCCAACATGACTAATAATGTAGCAGAA    600

BSNT_00063___    601 GCAGTCGAATTAAGTCGAAATGATGAGTTTGCAGAGTCTAGAGCGAAAGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00310___ho    601 GCAGTCGAATTAAGTCGAAATGATGAGTTTGCAGAGTCTAGAGCGAAAGT    650

BSNT_00063___    651 GATAAAATTGTATGAAGTCCTACACCAGCGGAAAGGACATGCTTTTTTCT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00310___ho    651 GATAAAATTGTATGAAGTCCTACACCAGCGGAAAGGACATGCTTTTTTCT    700

BSNT_00063___    701 TTATTCAAGATCAATGGATGCCCTTTTTCAAAGAAAAAACCCATCAAGAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00310___ho    701 TTATTCAAGATCAATGGATGCCCTTTTTCAAAGAAAAAACCCATCAAGAA    750

BSNT_00063___    751 ATGGGTCTTGATATGCTCTTATTGATATATCGTGATGTGTTGTCCATCCA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00310___ho    751 ATGGGTCTTGATATGCTCTTATTGATATATCGTGATGTGTTGTCCATCCA    800

BSNT_00063___    801 AATAGGAAATGAAGATAAATTGATTTATCAAGACTTATTCCAATCAATAA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00310___ho    801 AATAGGAAATGAAGATAAATTGATTTATCAAGACTTATTCCAATCAATAA    850

BSNT_00063___    851 AACAGCATGCGCTACAATCAACACAACAAAGCGTTACGAATCAGATACTT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00310___ho    851 AACAGCATGCGCTACAATCAACACAACAAAGCGTTACGAATCAGATACTT    900

BSNT_00063___    901 GCTGTTTTAGAAGCAAAGAAACGGCTTCATTCCAATGTGAATGTACAAGG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00310___ho    901 GCTGTTTTAGAAGCAAAGAAACGGCTTCATTCCAATGTGAATGTACAAGG    950

BSNT_00063___    951 ATTAATGGAGCACTTGGTGTTAATGTTGCAGGAGGGATAA    990
                     ||||||||||||||||||||||||||||||||||||||||
BSU00310___ho    951 ATTAATGGAGCACTTGGTGTTAATGTTGCAGGAGGGATAA    990


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.