Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00061 and BSU00290

See Amino acid alignment / Visit BSNT_00061 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:54
# Commandline: needle
#    -asequence dna-align/BSNT_00061___yaaQ.1.22522.seq
#    -bsequence dna-align/BSU00290___yaaQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00061___yaaQ-BSU00290___yaaQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00061___yaaQ-BSU00290___yaaQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00061___yaaQ
# 2: BSU00290___yaaQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 330
# Identity:     328/330 (99.4%)
# Similarity:   328/330 (99.4%)
# Gaps:           0/330 ( 0.0%)
# Score: 1632.0
# 
#
#=======================================

BSNT_00061___      1 ATGAAATTGATAGTGGCAGTTGTACAAGATCAGGACAGCAACAGACTTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00290___ya      1 ATGAAATTGATAGTGGCAGTTGTACAAGATCAGGACAGCAACAGACTTTT     50

BSNT_00061___     51 GAAAACCTTAACGGATCACAACTTCAGAGTCACAAAGCTTGCGACGACAG    100
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU00290___ya     51 GAAAACCTTAACGGATCACAACTTCAGAGTCACAAAGCTTGCAACGACAG    100

BSNT_00061___    101 GAGGATTTCTTAAATCAGGCAATACAACGTTTATGATCGGTGTCGAGGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00290___ya    101 GAGGATTTCTTAAATCAGGCAATACAACGTTTATGATCGGTGTCGAGGAT    150

BSNT_00061___    151 ATACGCGTCAATAAAGCGTTGAGTCTCATTAAAGAAAACGGGCAGAAACG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00290___ya    151 ATACGCGTCAATAAAGCGTTGAGTCTCATTAAAGAAAACGGGCAGAAACG    200

BSNT_00061___    201 TGATCAGATGATTGCCCCTGTATCTCCAATGGGCGGAAATGCTGATTCCT    250
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU00290___ya    201 TGATCAGATGATTGCCCCTGTATCTCCAATGGGTGGAAATGCTGATTCCT    250

BSNT_00061___    251 ATGTCCCTTATCCAGTCGAAGTTGAAGTTGGCGGAGCGACAGTATTTGTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00290___ya    251 ATGTCCCTTATCCAGTCGAAGTTGAAGTTGGCGGAGCGACAGTATTTGTC    300

BSNT_00061___    301 CTTCCAGTCGATGAATTTCATCAATTTTAA    330
                     ||||||||||||||||||||||||||||||
BSU00290___ya    301 CTTCCAGTCGATGAATTTCATCAATTTTAA    330


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