Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00058 and BSU00260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:15:53
# Commandline: needle
# -asequence dna-align/BSNT_00058___yaaN.1.22522.seq
# -bsequence dna-align/BSU00260___yaaN.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00058___yaaN-BSU00260___yaaN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00058___yaaN-BSU00260___yaaN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00058___yaaN
# 2: BSU00260___yaaN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1162
# Identity: 1149/1162 (98.9%)
# Similarity: 1149/1162 (98.9%)
# Gaps: 2/1162 ( 0.2%)
# Score: 5691.0
#
#
#=======================================
BSNT_00058___ 1 ATGAACCGAGACCAAAGCGACCTTCATATAGATGAATTATTGGCAGATCC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 1 ATGAACCGAGACCAAAGCGACCTTCATATAGATGAATTATTGGCAGATCC 50
BSNT_00058___ 51 TTTTGGTGGTAACATAGAGATACCAGGTTCGGAGGCTGTAAAAGCAGAGA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 51 TTTTGGTGGTAACATAGAGATACCAGGTTCGGAGGCTGTAAAAGCAGAGA 100
BSNT_00058___ 101 AAGAGCAAGTACGGCTTGTTGATGTTCTTCCTGAGGAAAACAAGGAAAAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 101 AAGAGCAAGTACGGCTTGTTGATGTTCTTCCTGAGGAAAACAAGGAAAAA 150
BSNT_00058___ 151 GCAATTCAGCTTGCTGGACAGATTGATCATAAAAATATGCAAAGCATTGT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 151 GCAATTCAGCTTGCTGGACAGATTGATCATAAAAATATGCAAAGCATTGT 200
BSNT_00058___ 201 CTTATACGGTTCACAAGCTCAATCTAAACTGCTGAACTTTTCTCATGATA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 201 CTTATACGGTTCACAAGCTCAATCTAAACTGCTGAACTTTTCTCATGATA 250
BSNT_00058___ 251 TGATTAATCATGTTCAAAAGAAGGATGTCGGGGAGATTGGCGAAATACTT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 251 TGATTAATCATGTTCAAAAGAAGGATGTCGGGGAGATTGGCGAAATACTT 300
BSNT_00058___ 301 GGAGAGCTGATGAAAAAGCTGGAGCAAGTAAATCCTGATGATCTCCAATC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 301 GGAGAGCTGATGAAAAAGCTGGAGCAAGTAAATCCTGATGATCTCCAATC 350
BSNT_00058___ 351 TAAGAAAAAGGGTATTTTGGCACGCATGTTTGGAAGAGTATCAAGTTCTC 400
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU00260___ya 351 TAAGAAAAAGGGTTTTTTGGCACGCATGTTTGGAAGAGTATCAAGTTCTC 400
BSNT_00058___ 401 TTCAAGAGGTGCTGTCTAAATACCAAAAGACCAGTGTGCAGATAGACAGA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 401 TTCAAGAGGTGCTGTCTAAATACCAAAAGACCAGTGTGCAGATAGACAGA 450
BSNT_00058___ 451 ATCAGCTTGAAGCTGGAGCACTCTAAAAATGCTTTAATCAGTGACAACAA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 451 ATCAGCTTGAAGCTGGAGCACTCTAAAAATGCTTTAATCAGTGACAACAA 500
BSNT_00058___ 501 GCTGTTAGAGCAGTTATATGAAAAAAATAAAGAATATTTTGCCGCGCTGA 550
|||||||||||||||||||||||||||||||||||||||.||.|||||||
BSU00260___ya 501 GCTGTTAGAGCAGTTATATGAAAAAAATAAAGAATATTTCGCAGCGCTGA 550
BSNT_00058___ 551 ATGTTTATATTGCTGCAGGAGAACTGAAGCTGGAGGAATTAAAAACGAAA 600
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU00260___ya 551 ATGTTTATATTGCTGCAGGAGAACTGAAGCTGGAGGAATTAAAAACAAAA 600
BSNT_00058___ 601 ACAATTCCTGAACTGAAGCAACAGGCTGAATCGAGTGATCATAACCAAAT 650
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 601 ACGATTCCTGAACTGAAGCAACAGGCTGAATCGAGTGATCATAACCAAAT 650
BSNT_00058___ 651 GGCCGTTCAAGAGGTGAATGATTTAATTCAATTTGCTGACCGGTTAGATA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 651 GGCCGTTCAAGAGGTGAATGATTTAATTCAATTTGCTGACCGGTTAGATA 700
BSNT_00058___ 701 AAAGGGTGCATGATTTGTTGCTGAGCAGGCAAGTTACAATTCAAAGTGCA 750
|||||||||||||||||.||||||||||||||.|||||||.|||||||||
BSU00260___ya 701 AAAGGGTGCATGATTTGCTGCTGAGCAGGCAAATTACAATCCAAAGTGCA 750
BSNT_00058___ 751 CCGCAAATCAGGCTGATTCAAAATACAAACCAAGCGTTAGCTGAAAAGAT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 751 CCGCAAATCAGGCTGATTCAAAATACAAACCAAGCGTTAGCTGAAAAGAT 800
BSNT_00058___ 801 TCAGTCATCCATTGTGACAGCGATTCCGTTATGGAAAAATCAAGTTGCCA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 801 TCAGTCATCCATTGTGACAGCGATTCCGTTATGGAAAAATCAAGTTGCCA 850
BSNT_00058___ 851 TTGCGCTGACGCTTTTAAGGCAGCGCAATGCAGTGGATGCACAACAGAAA 900
||||.||||||||||||||||||||||||||||||||||||||.||||||
BSU00260___ya 851 TTGCACTGACGCTTTTAAGGCAGCGCAATGCAGTGGATGCACAGCAGAAA 900
BSNT_00058___ 901 GTATCTGATACAACCAATGAGCTTTTGCTGAAAAATGCGGAGCTTTTAAA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 901 GTATCTGATACAACCAATGAGCTTTTGCTGAAAAATGCGGAGCTTTTAAA 950
BSNT_00058___ 951 AACCAATACAATTGAAACTGCACGGGCAAATGAAAGAGGCCTTGTTGATA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 951 AACCAATACAATTGAAACTGCACGGGCAAATGAAAGAGGCCTTGTTGATA 1000
BSNT_00058___ 1001 TAGATACCTTGAAGAAGGTGCAGGAAAGCTTAATAAGCACGCTTGAAGAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 1001 TAGATACCTTGAAGAAGGTGCAGGAAAGCTTAATAAGCACGCTTGAAGAA 1050
BSNT_00058___ 1051 ACACTGACTATACAAGAAGAAGGACGAATCAAACGCCGTCAGGCAGAAGA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00260___ya 1051 ACACTGACTATACAAGAAGAAGGACGAATCAAACGCCGTCAGGCAGAAGA 1100
BSNT_00058___ 1101 AGAGCTCATGATGATGGAAGGCGACCTGAAGCAAAAGCTGCTTACAATAA 1150
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU00260___ya 1101 AGAGCTCATGATGATGGAAGGCGACCTGAAGCAAAAGCTGATTACAATAA 1150
BSNT_00058___ 1151 AGGAAAGATAG- 1161
||||||||| |
BSU00260___ya 1151 AGGAAAGAT-GA 1161
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