Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00043 and BSU00230

See Amino acid alignment / Visit BSNT_00043 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:53
# Commandline: needle
#    -asequence dna-align/BSNT_00043___bofA.1.22522.seq
#    -bsequence dna-align/BSU00230___bofA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00043___bofA-BSU00230___bofA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00043___bofA-BSU00230___bofA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00043___bofA
# 2: BSU00230___bofA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     260/264 (98.5%)
# Similarity:   260/264 (98.5%)
# Gaps:           0/264 ( 0.0%)
# Score: 1284.0
# 
#
#=======================================

BSNT_00043___      1 ATGGAGCCTATTTTTATTATTGGGATTATTTTAGGATTGGTTATTCTTCT     50
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU00230___bo      1 ATGGAGCCTATTTTTATTATTGGGATTATTTTAGGACTGGTTATTCTTCT     50

BSNT_00043___     51 TTTTTTATCAGGTTCAGCTGCGAAGCCTTTAAAGTGGATTGGCATCACAG    100
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU00230___bo     51 TTTTTTATCAGGTTCAGCAGCGAAGCCTTTAAAGTGGATTGGCATCACAG    100

BSNT_00043___    101 CTGTTAAATTTGTGGCAGGTGCTTTGCTGCTGGTTTGTGTAAATATGTTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00230___bo    101 CTGTTAAATTTGTGGCAGGTGCTTTGCTGCTGGTTTGTGTAAATATGTTT    150

BSNT_00043___    151 GGCGGCAGTCTTGGCATTCATGTGCCGATTAATCTGGTTACAACAGCTAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00230___bo    151 GGCGGCAGTCTTGGCATTCATGTGCCGATTAATCTGGTTACAACAGCTAT    200

BSNT_00043___    201 CAGCGGAATTTTAGGGATACCCGGAATAGCTGCGTTAGTCGTTATTAAGC    250
                     |||||||||||||||.||||||||||||||||||||||||||.|||||||
BSU00230___bo    201 CAGCGGAATTTTAGGAATACCCGGAATAGCTGCGTTAGTCGTCATTAAGC    250

BSNT_00043___    251 AATTTATCATTTAA    264
                     ||||||||||||||
BSU00230___bo    251 AATTTATCATTTAA    264


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