Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00036 and BSU00180

See Amino acid alignment / Visit BSNT_00036 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:52
# Commandline: needle
#    -asequence dna-align/BSNT_00036___yaaJ.1.22522.seq
#    -bsequence dna-align/BSU00180___tadA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00036___yaaJ-BSU00180___tadA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00036___yaaJ-BSU00180___tadA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00036___yaaJ
# 2: BSU00180___tadA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 486
# Identity:     476/486 (97.9%)
# Similarity:   476/486 (97.9%)
# Gaps:           0/486 ( 0.0%)
# Score: 2340.0
# 
#
#=======================================

BSNT_00036___      1 ATGACACAAGATGAACTTTATATGAAAGAAGCAATTAAAGAAGCGAAAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00180___ta      1 ATGACACAAGATGAACTTTATATGAAAGAAGCAATTAAAGAAGCGAAAAA     50

BSNT_00036___     51 GGCTGAAGAGAAAGGTGAAGTGCCAATAGGTGCGGTGCTTGTCGTTAATG    100
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU00180___ta     51 GGCTGAAGAGAAAGGTGAAGTGCCAATAGGTGCGGTGCTTGTCATTAATG    100

BSNT_00036___    101 ATGAAATTATAGCGCGTGCACATAATTTAAGAGAGACTGAGCAACGATCT    150
                     .||||||||||||||||||.||||||||||||||||||||.||.||||||
BSU00180___ta    101 GTGAAATTATAGCGCGTGCGCATAATTTAAGAGAGACTGAACAGCGATCT    150

BSNT_00036___    151 ATTGCCCATGCAGAAATGCTTGTAATTGATGAAGCATGTAAGGCACTCGG    200
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU00180___ta    151 ATTGCCCATGCAGAAATGCTTGTAATTGATGAAGCGTGTAAGGCACTCGG    200

BSNT_00036___    201 AACATGGCGGCTGGAAGGTGCGACTCTTTATGTGACGCTTGAGCCATGTC    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU00180___ta    201 AACATGGCGGCTGGAAGGTGCGACTCTTTATGTGACGCTTGAGCCTTGTC    250

BSNT_00036___    251 CAATGTGTGCTGGTGCCGTCGTACTTTCTCGAGTGGAAAAAGTGGTTTTT    300
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU00180___ta    251 CAATGTGTGCTGGTGCAGTCGTACTTTCTCGAGTGGAAAAAGTGGTTTTT    300

BSNT_00036___    301 GGCGCATTTGATCCGAAAGGCGGCTGTTCAGGCACACTAATGAACCTTCT    350
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU00180___ta    301 GGCGCATTTGATCCGAAAGGCGGCTGTTCAGGCACGCTAATGAACCTTCT    350

BSNT_00036___    351 TCAGGAGGAACGCTTTAATCATCAGGCTGAAGTGGTGAGCGGTGTACTTG    400
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU00180___ta    351 TCAGGAGGAACGCTTTAATCATCAGGCTGAAGTGGTGAGCGGTGTGCTTG    400

BSNT_00036___    401 AGGAAGAATGCGGCGGAATGCTCAGTGCGTTTTTCAGAGAACTAAGAAAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00180___ta    401 AGGAAGAATGCGGCGGAATGCTCAGTGCGTTTTTCAGAGAACTAAGAAAA    450

BSNT_00036___    451 AAGAAGAAAGCCGCCAGGAAAAACTTGTCTGAATAG    486
                     ||||||||||||||||||||||||||||||||||||
BSU00180___ta    451 AAGAAGAAAGCCGCCAGGAAAAACTTGTCTGAATAG    486


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