Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00035 and BSU00170

See Amino acid alignment / Visit BSNT_00035 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:52
# Commandline: needle
#    -asequence dna-align/BSNT_00035___yaaI.1.22522.seq
#    -bsequence dna-align/BSU00170___yaaI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00035___yaaI-BSU00170___yaaI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00035___yaaI-BSU00170___yaaI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00035___yaaI
# 2: BSU00170___yaaI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 546
# Identity:     535/546 (98.0%)
# Similarity:   535/546 (98.0%)
# Gaps:           0/546 ( 0.0%)
# Score: 2631.0
# 
#
#=======================================

BSNT_00035___      1 TTGTCCAAAGCAGATACAGCCCTTCTCATTGTAGACATGATCAATAATTT     50
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU00170___ya      1 TTGTCCAAAGCAGATAAAGCCCTTCTCATTGTAGACATGATCAATAATTT     50

BSNT_00035___     51 TGAATTCGATATGGGAGAAACCCTCGCTAAAAAAACAGAAAAAATCGTTC    100
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU00170___ya     51 TGAATTCGATATGGGGGAAACCCTCGCTAAAAAAACAGAAAAAATCGTTC    100

BSNT_00035___    101 CTCATATTTTATCATTAAAGGAGCACGCGAGACAAAATGAATGGCCGATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00170___ya    101 CTCATATTTTATCATTAAAGGAGCACGCGAGACAAAATGAATGGCCGATT    150

BSNT_00035___    151 ATTTACATCAATGATCATTATGGACTTTGGCAAGCTGACATTAAAAACAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00170___ya    151 ATTTACATCAATGATCATTATGGACTTTGGCAAGCTGACATTAAAAACAT    200

BSNT_00035___    201 TCAGCAAGAATGCACAAATGAAAGAAGCAAGGATATCATCACAAAGATAG    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU00170___ya    201 ACAGCAAGAATGCACAAATGAAAGAAGCAAGGATATCATCACAAAGATAG    250

BSNT_00035___    251 CTCCGAAAGATGCTGATTATTTTTTAATCAAACCGAAACATTCCGCTTTC    300
                     |||||..|||||||||||||||||||||||||||||||||||||||||||
BSU00170___ya    251 CTCCGGTAGATGCTGATTATTTTTTAATCAAACCGAAACATTCCGCTTTC    300

BSNT_00035___    301 TACGAAACTGCACTTCACACCCTTCTTACTGAGTTGCAGGTGAGACATAT    350
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU00170___ya    301 TACGAAACAGCACTTCACACCCTTCTTACTGAGTTGCAGGTGAGACATAT    350

BSNT_00035___    351 TATCTTAACAGGTATAGCCGGCAATATATGTGTGCTGTTTACTGCTAATG    400
                     ||||.|||||||||||||||||||||||||.|||||||||||.|||||||
BSU00170___ya    351 TATCATAACAGGTATAGCCGGCAATATATGCGTGCTGTTTACCGCTAATG    400

BSNT_00035___    401 ACGCTTATATGAGGGAATACAGCATCACGATTCCTAAGGACTGTATCGCG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00170___ya    401 ACGCTTATATGAGGGAATACAGCATCACGATTCCTAAGGACTGTATCGCG    450

BSNT_00035___    451 TCAAACAGTGACGAAGATAACGAATTCGCCTTAACTATGATGGAGAATGT    500
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU00170___ya    451 TCAAACAGTGACGAAGATAACGAATTCGCCTTAACCATGATGGAGAATGT    500

BSNT_00035___    501 TCTTTTCGCAGAAATTACGACGGAAGAACAAATTACAGAAAAATAA    546
                     |||||||||||||||||||||||||||||||||||.||||||||||
BSU00170___ya    501 TCTTTTCGCAGAAATTACGACGGAAGAACAAATTATAGAAAAATAA    546


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