Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00027 and BSU00130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:15:52
# Commandline: needle
# -asequence dna-align/BSNT_00027___serS.1.22522.seq
# -bsequence dna-align/BSU00130___serS.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00027___serS-BSU00130___serS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00027___serS-BSU00130___serS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00027___serS
# 2: BSU00130___serS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1335
# Identity: 1268/1335 (95.0%)
# Similarity: 1268/1335 (95.0%)
# Gaps: 57/1335 ( 4.3%)
# Score: 6300.0
#
#
#=======================================
BSNT_00027___ 1 ATGGGGATGAGGGCTCTTTTTATTTTCGACAAATCAATAAAAAAAGGAGT 50
BSU00130___se 0 -------------------------------------------------- 0
BSNT_00027___ 51 GTTTCGCATGCTTGATACGAAAATGCTGAGAGCAAATTTTCAAGAAATTA 100
|||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 1 -------ATGCTTGATACGAAAATGCTGAGAGCAAATTTTCAAGAAATTA 43
BSNT_00027___ 101 AAGCAAAGCTTGTACACAAAGGCGAAGACTTAACTGATTTTGATAAGTTT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 44 AAGCAAAGCTTGTACACAAAGGCGAAGACTTAACTGATTTTGATAAGTTT 93
BSNT_00027___ 151 GAGGCGCTGGATGATAGACGAAGAGAGCTTATCGGCAAGGTTGAAGAGTT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 94 GAGGCGCTGGATGATAGACGAAGAGAGCTTATCGGCAAGGTTGAAGAGTT 143
BSNT_00027___ 201 AAAAGGAAAACGAAATGAAGTTTCTCAGCAGGTTGCTGTGCTGAAGCGTG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 144 AAAAGGAAAACGAAATGAAGTTTCTCAGCAGGTTGCTGTGCTGAAGCGTG 193
BSNT_00027___ 251 AGAAAAAAGAAGCGGATCACATTATTAAAGAAATGCGTGAAGTCGGCGAG 300
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU00130___se 194 AGAAAAAAGACGCGGATCACATTATTAAAGAAATGCGTGAAGTCGGCGAG 243
BSNT_00027___ 301 GAAATTAAAAAGCTTGATGAAGAATTGCGAACAGTGGAAGCTGAGCTTGA 350
||||||||||||||.|||||||||||.||.||||||||||||||||||||
BSU00130___se 244 GAAATTAAAAAGCTCGATGAAGAATTACGGACAGTGGAAGCTGAGCTTGA 293
BSNT_00027___ 351 TACAATCCTTCTCTCAATCCCGAATATTCCGCATGAGTCTGTACCTGTCG 400
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU00130___se 294 TACAATCCTGCTCTCAATCCCGAATATTCCGCATGAGTCTGTACCTGTCG 343
BSNT_00027___ 401 GTGAAACAGAAGACGACAACGTAGAAGTGCGTAAATGGGGTGAAAAGCCT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 344 GTGAAACAGAAGACGACAACGTAGAAGTGCGTAAATGGGGTGAAAAGCCT 393
BSNT_00027___ 451 TCATTTGCTTATGAGCCGAAGCCGCACTGGGATATTGCGGATGAGCTGGG 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 394 TCATTTGCTTATGAGCCGAAGCCGCACTGGGATATTGCGGATGAGCTGGG 443
BSNT_00027___ 501 TATTCTGGATTTTGAACGTGCTGCCAAAGTAACAGGAAGCCGTTTCGTGT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 444 TATTCTGGATTTTGAACGTGCTGCCAAAGTAACAGGAAGCCGTTTCGTGT 493
BSNT_00027___ 551 TCTATAAAGGCTTAGGTGCTCGTCTGGAGCGTGCGCTTTATAACTTTATG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 494 TCTATAAAGGCTTAGGTGCTCGTCTGGAGCGTGCGCTTTATAACTTTATG 543
BSNT_00027___ 601 CTTGATCTGCATGTGGATGAGTATAACTACACTGAAGTGATCCCGCCATA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 544 CTTGATCTGCATGTGGATGAGTATAACTACACTGAAGTGATCCCGCCATA 593
BSNT_00027___ 651 TATGGTAAACCGCGCAAGCATGACGGGAACGGGGCAGCTTCCTAAATTTG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 594 TATGGTAAACCGCGCAAGCATGACGGGAACGGGGCAGCTTCCTAAATTTG 643
BSNT_00027___ 701 AAGAGGATGCATTTAAAATCAGAGAAGAAGATTATTTCTTAATTCCAACG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 644 AAGAGGATGCATTTAAAATCAGAGAAGAAGATTATTTCTTAATTCCAACG 693
BSNT_00027___ 751 GCGGAAGTGCCGATTACAAACATGCATCGCGATGAAATCCTTTCAGGTGA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 694 GCGGAAGTGCCGATTACAAACATGCATCGCGATGAAATCCTTTCAGGTGA 743
BSNT_00027___ 801 CAGCCTGCCGATCAACTATGCGGCATTCAGTGCTTGCTTCCGTTCTGAAG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 744 CAGCCTGCCGATCAACTATGCGGCATTCAGTGCTTGCTTCCGTTCTGAAG 793
BSNT_00027___ 851 CTGGTTCAGCAGGACGTGACACACGCGGATTAATTCGTCAGCACCAATTT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 794 CTGGTTCAGCAGGACGTGACACACGCGGATTAATTCGTCAGCACCAATTT 843
BSNT_00027___ 901 AATAAAGTTGAGCTTGTAAAGTTTGTGAAGCCTGAAGATTCTTATGAAGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 844 AATAAAGTTGAGCTTGTAAAGTTTGTGAAGCCTGAAGATTCTTATGAAGA 893
BSNT_00027___ 951 ATTAGAGAAGCTTACAAACCAAGCAGAACGGGTTCTTCAGCTGCTTGAGC 1000
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU00130___se 894 ATTAGAGAAACTTACAAACCAAGCAGAACGGGTTCTTCAGCTGCTTGAGC 943
BSNT_00027___ 1001 TTCCATACCGTGTCATGAGCATGTGTACGGGTGATTTAGGCTTTACGGCT 1050
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU00130___se 944 TTCCATACCGTGTCATGAGCATGTGTACGGGTGACTTAGGCTTTACGGCT 993
BSNT_00027___ 1051 GCGAAAAAATACGATATCGAAGTTTGGATTCCAAGCCAAGACACATATCG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 994 GCGAAAAAATACGATATCGAAGTTTGGATTCCAAGCCAAGACACATATCG 1043
BSNT_00027___ 1101 AGAAATCTCTTCTTGCAGCAACTTCGAAGCGTTCCAGGCGAGACGTGCGA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 1044 AGAAATCTCTTCTTGCAGCAACTTCGAAGCGTTCCAGGCGAGACGTGCGA 1093
BSNT_00027___ 1151 ATATTCGATTCAGACGTGAAGCGAAAGGCAAGCCTGAGCATGTACACACA 1200
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 1094 ATATTCGTTTCAGACGTGAAGCGAAAGGCAAGCCTGAGCATGTACACACA 1143
BSNT_00027___ 1201 CTGAACGGTTCAGGACTGGCGGTTGGAAGAACAGTTGCCGCTATCTTAGA 1250
||||||||.|||||||||||||||||||||||||||||.|||||||||||
BSU00130___se 1144 CTGAACGGCTCAGGACTGGCGGTTGGAAGAACAGTTGCTGCTATCTTAGA 1193
BSNT_00027___ 1251 AAATTATCAGCAGGAAGACGGAAGCGTTGTGATTCCGAAAGTGCTTCGTC 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se 1194 AAATTATCAGCAGGAAGACGGAAGCGTTGTGATTCCGAAAGTGCTTCGTC 1243
BSNT_00027___ 1301 CTTATATGGGGAATAGAGAAGTAATGAAACCGTAA 1335
|||||||||||||||||||||||||||||||||||
BSU00130___se 1244 CTTATATGGGGAATAGAGAAGTAATGAAACCGTAA 1278
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