Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00024 and BSU00110

See Amino acid alignment / Visit BSNT_00024 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:51
# Commandline: needle
#    -asequence dna-align/BSNT_00024___yaaD.1.22522.seq
#    -bsequence dna-align/BSU00110___yaaD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00024___yaaD-BSU00110___yaaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00024___yaaD-BSU00110___yaaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00024___yaaD
# 2: BSU00110___yaaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 885
# Identity:     880/885 (99.4%)
# Similarity:   880/885 (99.4%)
# Gaps:           0/885 ( 0.0%)
# Score: 4380.0
# 
#
#=======================================

BSNT_00024___      1 ATGGCTCAAACAGGTACTGAACGTGTAAAACGCGGAATGGCAGAAATGCA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00110___ya      1 ATGGCTCAAACAGGTACTGAACGTGTAAAACGCGGAATGGCAGAAATGCA     50

BSNT_00024___     51 AAAAGGCGGCGTCATCATGGACGTCATCAATGCGGAACAAGCGAAAATCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00110___ya     51 AAAAGGCGGCGTCATCATGGACGTCATCAATGCGGAACAAGCGAAAATCG    100

BSNT_00024___    101 CTGAAGAAGCTGGAGCTGTCGCTGTAATGGCGCTAGAACGTGTGCCGGCA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU00110___ya    101 CTGAAGAAGCTGGAGCTGTCGCTGTAATGGCGCTAGAACGTGTGCCAGCA    150

BSNT_00024___    151 GATATTCGCGCGGCTGGAGGAGTTGCCCGTATGGCTGACCCTACAATCGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00110___ya    151 GATATTCGCGCGGCTGGAGGAGTTGCCCGTATGGCTGACCCTACAATCGT    200

BSNT_00024___    201 GGAAGAAGTAATGAATGCAGTATCTATCCCTGTAATGGCAAAAGCGCGTA    250
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU00110___ya    201 GGAAGAAGTAATGAATGCAGTATCTATCCCGGTAATGGCAAAAGCGCGTA    250

BSNT_00024___    251 TCGGACATGTTGTTGAAGCGCGTGTGCTTGAAGCTATGGGTGTTGACTAT    300
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU00110___ya    251 TCGGACATATTGTTGAAGCGCGTGTGCTTGAAGCTATGGGTGTTGACTAT    300

BSNT_00024___    301 ATTGATGAAAGTGAAGTTCTGACGCCGGCTGATGAAGAATTTCATTTAAA    350
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU00110___ya    301 ATTGATGAAAGTGAAGTTCTGACGCCGGCTGACGAAGAATTTCATTTAAA    350

BSNT_00024___    351 TAAAAATGAATACACAGTTCCTTTTGTTTGTGGCTGCCGTGATCTTGGTG    400
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU00110___ya    351 TAAAAATGAATACACAGTTCCTTTTGTCTGTGGCTGCCGTGATCTTGGTG    400

BSNT_00024___    401 AAGCAACACGCCGTATTGCGGAAGGTGCTTCTATGCTTCGCACAAAAGGT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00110___ya    401 AAGCAACACGCCGTATTGCGGAAGGTGCTTCTATGCTTCGCACAAAAGGT    450

BSNT_00024___    451 GAGCCTGGAACAGGTAATATTGTTGAGGCTGTTCGCCATATGCGTAAAGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00110___ya    451 GAGCCTGGAACAGGTAATATTGTTGAGGCTGTTCGCCATATGCGTAAAGT    500

BSNT_00024___    501 TAACGCTCAAGTGCGCAAAGTAGTTGCGATGAGTGAGGATGAGCTAATGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00110___ya    501 TAACGCTCAAGTGCGCAAAGTAGTTGCGATGAGTGAGGATGAGCTAATGA    550

BSNT_00024___    551 CAGAAGCGAAAAACCTAGGTGCTCCTTACGAGCTTCTTCTTCAAATTAAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00110___ya    551 CAGAAGCGAAAAACCTAGGTGCTCCTTACGAGCTTCTTCTTCAAATTAAA    600

BSNT_00024___    601 AAAGACGGCAAGCTTCCTGTCGTTAACTTTGCCGCTGGCGGCGTAGCAAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00110___ya    601 AAAGACGGCAAGCTTCCTGTCGTTAACTTTGCCGCTGGCGGCGTAGCAAC    650

BSNT_00024___    651 TCCAGCTGATGCTGCTCTCATGATGCAGCTTGGTGCTGACGGAGTATTTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00110___ya    651 TCCAGCTGATGCTGCTCTCATGATGCAGCTTGGTGCTGACGGAGTATTTG    700

BSNT_00024___    701 TTGGTTCTGGTATTTTTAAATCAGACAACCCTGCTAAATTTGCGAAAGCA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00110___ya    701 TTGGTTCTGGTATTTTTAAATCAGACAACCCTGCTAAATTTGCGAAAGCA    750

BSNT_00024___    751 ATTGTGGAAGCAACAACTCACTTTACTGATTACAAATTAATCGCTGAGTT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00110___ya    751 ATTGTGGAAGCAACAACTCACTTTACTGATTACAAATTAATCGCTGAGTT    800

BSNT_00024___    801 GTCAAAAGAGCTTGGTACTGCAATGAAAGGGATTGAAATCTCAAACTTAC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00110___ya    801 GTCAAAAGAGCTTGGTACTGCAATGAAAGGGATTGAAATCTCAAACTTAC    850

BSNT_00024___    851 TTCCAGAACAGCGTATGCAAGAACGCGGCTGGTAA    885
                     |||||||||||||||||||||||||||||||||||
BSU00110___ya    851 TTCCAGAACAGCGTATGCAAGAACGCGGCTGGTAA    885


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