Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00006 and BSU00060

See Amino acid alignment / Visit BSNT_00006 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:50
# Commandline: needle
#    -asequence dna-align/BSNT_00006___gyrB.1.22522.seq
#    -bsequence dna-align/BSU00060___gyrB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00006___gyrB-BSU00060___gyrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00006___gyrB-BSU00060___gyrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00006___gyrB
# 2: BSU00060___gyrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1917
# Identity:    1899/1917 (99.1%)
# Similarity:  1899/1917 (99.1%)
# Gaps:           0/1917 ( 0.0%)
# Score: 9423.0
# 
#
#=======================================

BSNT_00006___      1 ATGGAACAGCAGCAAAACAGTTATGATGAAAATCAGATACAGGTACTAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy      1 ATGGAACAGCAGCAAAACAGTTATGATGAAAATCAGATACAGGTACTAGA     50

BSNT_00006___     51 AGGATTGGAAGCTGTTCGTAAAAGACCGGGGATGTATATCGGTTCGACAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy     51 AGGATTGGAAGCTGTTCGTAAAAGACCGGGGATGTATATCGGTTCGACAA    100

BSNT_00006___    101 ACAGCAAAGGCCTTCACCACCTGGTATGGGAAATTGTCGACAATAGTATT    150
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU00060___gy    101 ACAGCAAAGGCCTTCACCACTTGGTATGGGAAATTGTCGACAATAGTATT    150

BSNT_00006___    151 GACGAAGCCCTCGCCGGTTATTGTACGGATATCAATATCCAAATCGAAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy    151 GACGAAGCCCTCGCCGGTTATTGTACGGATATCAATATCCAAATCGAAAA    200

BSNT_00006___    201 AGACAACAGTATCACGGTTGTAGATAATGGCCGCGGTATTCCAGTCGGTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy    201 AGACAACAGTATCACGGTTGTAGATAATGGCCGCGGTATTCCAGTCGGTA    250

BSNT_00006___    251 TTCATGAAAAAATGGGCCGTCCTGCGGTAGAAGTCATTATGACGGTACTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU00060___gy    251 TTCATGAAAAAATGGGCCGTCCTGCGGTAGAAGTCATTATGACGGTGCTT    300

BSNT_00006___    301 CATGCCGGAGGAAAATTTGACGGAAGCGGCTATAAAGTATCCGGAGGATT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy    301 CATGCCGGAGGAAAATTTGACGGAAGCGGCTATAAAGTATCCGGAGGATT    350

BSNT_00006___    351 ACACGGTGTAGGTGCGTCTGTCGTAAACGCACTATCAACAGAGCTTGATG    400
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU00060___gy    351 ACACGGTGTAGGTGCGTCGGTCGTAAACGCACTATCAACAGAGCTTGATG    400

BSNT_00006___    401 TGACGGTTCACCGTGACGGTAAAATTCACCGCCAAACTTATAAACGCGGA    450
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU00060___gy    401 TGACGGTTCACCGTGACGGTAAAATTCACCGCCAAACCTATAAACGCGGA    450

BSNT_00006___    451 GTTCCGGTTACAGACCTTGAAATCATTGGCGAAACGGATCATACAGGAAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy    451 GTTCCGGTTACAGACCTTGAAATCATTGGCGAAACGGATCATACAGGAAC    500

BSNT_00006___    501 GACGACACATTTTGTCCCGGACCCTGAAATTTTCTCAGAAACAACCGAGT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy    501 GACGACACATTTTGTCCCGGACCCTGAAATTTTCTCAGAAACAACCGAGT    550

BSNT_00006___    551 ATGATTATGATCTGCTTGCCAACCGCGTACGTGAATTAGCCTTTTTAACA    600
                     |||||||.||||||||||||||||||||.|||||||||||||||||||||
BSU00060___gy    551 ATGATTACGATCTGCTTGCCAACCGCGTGCGTGAATTAGCCTTTTTAACA    600

BSNT_00006___    601 AAGGGCGTAAACATCACGATTGAGGATAAACGTGAAGGACAAGAGCGCAA    650
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU00060___gy    601 AAGGGCGTAAACATCACGATTGAAGATAAACGTGAAGGACAAGAGCGCAA    650

BSNT_00006___    651 AAATGAATACCATTACGAAGGCGGAATTAAAAGTTATGTAGAGTATTTAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy    651 AAATGAATACCATTACGAAGGCGGAATTAAAAGTTATGTAGAGTATTTAA    700

BSNT_00006___    701 ACCGCTCTAAAGAGGTTGTCCATGAAGAGCCGATTTACATTGAAGGCGAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy    701 ACCGCTCTAAAGAGGTTGTCCATGAAGAGCCGATTTACATTGAAGGCGAA    750

BSNT_00006___    751 AAGGACGGCATTACGGTTGAAGTGGCTTTGCAATACAATGACAGCTACAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy    751 AAGGACGGCATTACGGTTGAAGTGGCTTTGCAATACAATGACAGCTACAC    800

BSNT_00006___    801 AAGCAACATTTACTCGTTTACAAACAACATTAACACGTACGAAGGCGGTA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy    801 AAGCAACATTTACTCGTTTACAAACAACATTAACACGTACGAAGGCGGTA    850

BSNT_00006___    851 CCCATGAAGCTGGCTTCAAAACGGGCCTGACTCGTGTTATCAACGATTAC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy    851 CCCATGAAGCTGGCTTCAAAACGGGCCTGACTCGTGTTATCAACGATTAC    900

BSNT_00006___    901 GCCAGAAAAAAAGGGCTTATTAAAGAAAATGATCCAAACCTAAGCGGAGA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy    901 GCCAGAAAAAAAGGGCTTATTAAAGAAAATGATCCAAACCTAAGCGGAGA    950

BSNT_00006___    951 TGACGTAAGGGAAGGGCTGACAGCGATTATTTCAATCAAACACCCTGATC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy    951 TGACGTAAGGGAAGGGCTGACAGCGATTATTTCAATCAAACACCCTGATC   1000

BSNT_00006___   1001 CGCAGTTTGAGGGCCAAACGAAAACAAAGCTGGGCAACTCAGAAGCACGG   1050
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU00060___gy   1001 CGCAGTTTGAGGGCCAAACAAAAACAAAGCTGGGCAACTCAGAAGCACGG   1050

BSNT_00006___   1051 ACGATCACCGATACGTTATTTTCTACGGCGATGGAAACATTTATGCTGGA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy   1051 ACGATCACCGATACGTTATTTTCTACGGCGATGGAAACATTTATGCTGGA   1100

BSNT_00006___   1101 AAATCCAGATGCAGCCAAAAAAATTGTCGATAAAGGCTTAATGGCGGCAA   1150
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU00060___gy   1101 AAATCCAGATGCAGCCAAAAAAATTGTCGATAAAGGTTTAATGGCGGCAA   1150

BSNT_00006___   1151 GAGCAAGAATGGCTGCGAAAAAAGCCCGTGAACTAACACGTCGTAAGAGT   1200
                     |||||||||||||||||||||||||.||||||||||||||.|||||||||
BSU00060___gy   1151 GAGCAAGAATGGCTGCGAAAAAAGCGCGTGAACTAACACGCCGTAAGAGT   1200

BSNT_00006___   1201 GCTTTGGAAATTTCAAACCTGCCCGGTAAGTTAGCGGACTGCTCTTCAAA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy   1201 GCTTTGGAAATTTCAAACCTGCCCGGTAAGTTAGCGGACTGCTCTTCAAA   1250

BSNT_00006___   1251 AGATCCGAGCATCTCCGAGTTATATATCGTAGAGGGTGACTCTGCCGGAG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy   1251 AGATCCGAGCATCTCCGAGTTATATATCGTAGAGGGTGACTCTGCCGGAG   1300

BSNT_00006___   1301 GATCTGCTAAACAAGGACGCGACAGACATTTCCAAGCCATTTTGCCGCTT   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy   1301 GATCTGCTAAACAAGGACGCGACAGACATTTCCAAGCCATTTTGCCGCTT   1350

BSNT_00006___   1351 AGAGGTAAAATCCTAAACGTTGAAAAGGCCAGACTGGATAAAATCCTTTC   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy   1351 AGAGGTAAAATCCTAAACGTTGAAAAGGCCAGACTGGATAAAATCCTTTC   1400

BSNT_00006___   1401 TAACAACGAAGTTCGCTCTATGATCACAGCGCTCGGCACAGGTATTGGGG   1450
                     |||||||||||||||||||||||||||||||||||||||||||||.||.|
BSU00060___gy   1401 TAACAACGAAGTTCGCTCTATGATCACAGCGCTCGGCACAGGTATCGGAG   1450

BSNT_00006___   1451 AAGACTTCAACCTTGAGAAAGCCCGTTACCACAAAGTTGTCATTATGACA   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy   1451 AAGACTTCAACCTTGAGAAAGCCCGTTACCACAAAGTTGTCATTATGACA   1500

BSNT_00006___   1501 GATGCCGATGTTGACGGCGCGCACATCAGAACACTGCTGTTAACGTTCTT   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy   1501 GATGCCGATGTTGACGGCGCGCACATCAGAACACTGCTGTTAACGTTCTT   1550

BSNT_00006___   1551 TTACAGATATATGCGCCAAATTATCGAAAATGGCTACGTGTACATTGCAC   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU00060___gy   1551 TTACAGATATATGCGCCAAATTATCGAAAATGGCTACGTGTACATTGCGC   1600

BSNT_00006___   1601 AGCCGCCGCTCTACAAGGTTCAACAGGGGAAACGTGTTGAATATGCGTAC   1650
                     ||||||||||||||||||||||||||||||||||.|||||||||||.|||
BSU00060___gy   1601 AGCCGCCGCTCTACAAGGTTCAACAGGGGAAACGCGTTGAATATGCATAC   1650

BSNT_00006___   1651 AATGACAAGGAGCTTGAAGAGCTGTTAAAAACTCTTCCTCAAACGCCTAA   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy   1651 AATGACAAGGAGCTTGAAGAGCTGTTAAAAACTCTTCCTCAAACGCCTAA   1700

BSNT_00006___   1701 GCCTGGACTGCAGCGTTACAAAGGTCTTGGTGAAATGAATGCCACCCAGC   1750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy   1701 GCCTGGACTGCAGCGTTACAAAGGTCTTGGTGAAATGAATGCCACCCAGC   1750

BSNT_00006___   1751 TATGGGAGACAACCATGGATCCTAGCTCCAGAACACTTCTTCAGGTAACT   1800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy   1751 TATGGGAGACAACCATGGATCCTAGCTCCAGAACACTTCTTCAGGTAACT   1800

BSNT_00006___   1801 CTTGAAGATGCAATGGATGCGGACGAGACTTTTGAAATGCTTATGGGCGA   1850
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU00060___gy   1801 CTTGAAGATGCAATGGATGCGGATGAGACTTTTGAAATGCTTATGGGCGA   1850

BSNT_00006___   1851 CAAAGTAGAACCGCGCCGAAACTTCATAGAAGCGAATGCGAGATACGTTA   1900
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU00060___gy   1851 CAAGGTAGAACCGCGCCGAAACTTCATAGAAGCGAATGCGAGATACGTTA   1900

BSNT_00006___   1901 AAAATCTTGACATCTAA   1917
                     |||||||||||||||||
BSU00060___gy   1901 AAAATCTTGACATCTAA   1917


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